Evidence map›Paper›PMID 38789507›Full record

ArticleNature communications2024

Phosphorus deficiency alleviates iron limitation in Synechocystis cyanobacteria through direct PhoB-mediated gene regulation.

Guo-Wei Qiu, Wen-Can Zheng, Hao-Ming Yang, Yu-Ying Wang, Xing Qi, Da Huang, Guo-Zheng Dai, Huazhong Shi, Neil M Price, Bao-Sheng Qiu

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Guo-Wei Qiu *School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.ORCID http://orcid.org/0009-0002-3891-0387
Wen-Can Zheng *School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.ORCID http://orcid.org/0009-0005-7078-2794
Hao-Ming YangSchool of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.ORCID http://orcid.org/0009-0004-0235-9495
Yu-Ying WangSchool of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.ORCID http://orcid.org/0009-0003-2529-2329
Xing QiSchool of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.ORCID http://orcid.org/0009-0008-3126-0186
Da HuangSchool of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.
Guo-Zheng DaiSchool of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China.
Huazhong ShiDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, 79409, USA.ORCID http://orcid.org/0000-0003-3817-9774
Neil M PriceDepartment of Biology, McGill University, 1205 Docteur Penfield, Montreal, Québec, H3A 1B1, Canada.ORCID http://orcid.org/0000-0001-9986-9213
Bao-Sheng QiuSchool of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China. bsqiu@mail.ccnu.edu.cn.ORCID http://orcid.org/0000-0002-7848-1612

Funding

China Postdoctoral Science Foundation 2022M721291National Natural Science Foundation of China (National Science Foundation of China) 32200103National Natural Science Foundation of China (National Science Foundation of China) 32370398
6 · The paper itself

Abstract

Iron and phosphorus are essential nutrients that exist at low concentrations in surface waters and may be co-limiting resources for phytoplankton growth. Here, we show that phosphorus deficiency increases the growth of iron-limited cyanobacteria (Synechocystis sp. PCC 6803) through a PhoB-mediated regulatory network. We find that PhoB, in addition to its well-recognized role in controlling phosphate homeostasis, also regulates key metabolic processes crucial for iron-limited cyanobacteria, including ROS detoxification and iron uptake. Transcript abundances of PhoB-targeted genes are enriched in samples from phosphorus-depleted seawater, and a conserved PhoB-binding site is widely present in the promoters of the target genes, suggesting that the PhoB-mediated regulation may be highly conserved. Our findings provide molecular insights into the responses of cyanobacteria to simultaneous iron/phosphorus nutrient limitation.

Indexed as

Bacterial ProteinsGene Expression Regulation, BacterialIronPhosphorusSynechocystisHomeostasisPromoter Regions, GeneticReactive Oxygen SpeciesSeawaterBacterial ProteinsIronPhosphorusReactive Oxygen Species

Identifiers

PMID38789507
PMCPMC11126600

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.