Evidence map›Paper›PMID 38789435›Full record

ArticleNature communications2024

Contractile injection systems facilitate sporogenic differentiation of Streptomyces davawensis through the action of a phage tapemeasure protein-related effector.

Toshiki Nagakubo, Tatsuya Nishiyama, Tatsuya Yamamoto, Nobuhiko Nomura, Masanori Toyofuku

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Toshiki NagakuboFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan. nagakubo.toshiki.gp@u.tsukuba.ac.jp.ORCID http://orcid.org/0000-0003-0661-0304
Tatsuya NishiyamaLife Science Research Center, College of Bioresource Sciences, Nihon University, Chiyoda, Japan.
Tatsuya YamamotoFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan.
Nobuhiko NomuraFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan.
Masanori ToyofukuFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan. toyofuku.masanori.gf@u.tsukuba.ac.jp.ORCID http://orcid.org/0000-0003-4627-9230

Funding

MEXT | Japan Science and Technology Agency (JST) JPMJGX23B2MEXT | Japan Science and Technology Agency (JST) JPMJMI21G8MEXT | Japan Society for the Promotion of Science (JSPS) 19K15726MEXT | Japan Society for the Promotion of Science (JSPS) 23K13863MEXT | Japan Society for the Promotion of Science (JSPS) 23K26811
6 · The paper itself

Abstract

Contractile injection systems (CISs) are prokaryotic phage tail-like nanostructures loading effector proteins that mediate various biological processes. Although CIS functions have been diversified through evolution and hold the great potential as protein delivery systems, the functional characterisation of CISs and their effectors is currently limited to a few CIS lineages. Here, we show that the CISs of Streptomyces davawensis belong to a unique group of bacterial CISs distributed across distant phyla and facilitate sporogenic differentiation of this bacterium. CIS loss results in decreases in extracellular DNA release, biomass accumulation, and spore formation in S. davawensis. CISs load an effector, which is a remote homolog of phage tapemeasure proteins, and its C-terminal domain has endonuclease activity responsible for the CIS-associated phenotypes. Our findings illustrate that CISs can contribute to the reproduction of bacteria through the action of the effector and suggest an evolutionary link between CIS effectors and viral cargos.

Indexed as

Bacterial ProteinsBacteriophagesSpores, BacterialStreptomycesPhylogenyViral ProteinsViral Tail ProteinsBacterial ProteinsViral ProteinsViral Tail Proteins

Identifiers

PMID38789435
PMCPMC11126660

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.