Evidence map›Paper›PMID 38788889›Full record

ArticleJournal of biomedical informatics2024

Identifying erroneous height and weight values from adult electronic health records in the All of Us research program.

Andrew Guide, Lina Sulieman, Shawn Garbett, Robert M Cronin, Matthew Spotnitz, Karthik Natarajan, Robert J Carroll, Paul Harris, Qingxia Chen

Abstract read
In one paragraph

Article in Journal of biomedical informatics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors.

Andrew GuideDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, United States.
Lina SuliemanDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, United States.
Shawn GarbettDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, United States.
Robert M CroninDepartment of Internal Medicine, The Ohio State University, Columbus, OH, United States.
Matthew SpotnitzDepartment of Biomedical Informatics, Columbia University, New York, NY, United States.
Karthik NatarajanDepartment of Biomedical Informatics, Columbia University, New York, NY, United States.
Robert J CarrollDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, United States.
Paul HarrisDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, United States.
Qingxia ChenDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, United States; Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, United States. Electronic address: cindy.chen@vumc.org.

Funding

Enhancing All of Us Data Resources for Nutrition Precision Health: the All of Us Data and Research CenterU2COD023196 · OD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GLAZER, DAVID, HARRIS, PAUL A. · 2016 to 2022
$143.7M
Training in Biomedical Informatics at Columbia UniversityT15LM007079 · NLM · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI NOEMIE ELHADAD, GEORGE M HRIPCSAK · 1992 to 2026
$28.9M
Advancing Cancer Pharmacoepidemiology Research Through EHRs and InformaticsU24CA194215 · NCI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI TAO, CUI, YANG, PING · 2016 to 2020
$3.3M
DARSaW: Developing, Assessing, and Refining Synthetic Sampling Weights to Improve Generalizability of the All of Us Research Program DataR21MD019103 · NIMHD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI CHEN, QINGXIA, CRONIN, ROBERT M · 2023 to 2024
$449k
NCI NIH HHS U24 CA194215NIH HHS U2C OD023196NIMHD NIH HHS R21 MD019103NLM NIH HHS T15 LM007079
6 · The paper itself

Abstract

introductionElectronic Health Records (EHR) are a useful data source for research, but their usability is hindered by measurement errors. This study investigated an automatic error detection algorithm for adult height and weight measurements in EHR for the All of Us Research Program (All of Us).

methodsWe developed reference charts for adult heights and weights that were stratified on participant sex. Our analysis included 4,076,534 height and 5,207,328 wt measurements from ∼ 150,000 participants. Errors were identified using modified standard deviation scores, differences from their expected values, and significant changes between consecutive measurements. We evaluated our method with chart-reviewed heights (8,092) and weights (9,039) from 250 randomly selected participants and compared it with the current cleaning algorithm in All of Us.

resultsThe proposed algorithm classified 1.4 % of height and 1.5 % of weight errors in the full cohort. Sensitivity was 90.4 % (95 % CI: 79.0-96.8 %) for heights and 65.9 % (95 % CI: 56.9-74.1 %) for weights. Precision was 73.4 % (95 % CI: 60.9-83.7 %) for heights and 62.9 (95 % CI: 54.0-71.1 %) for weights. In comparison, the current cleaning algorithm has inferior performance in sensitivity (55.8 %) and precision (16.5 %) for height errors while having higher precision (94.0 %) and lower sensitivity (61.9 %) for weight errors. DISCUSSION: Our proposed algorithm outperformed in detecting height errors compared to weights. It can serve as a valuable addition to the current All of Us cleaning algorithm for identifying erroneous height values.

Indexed as

AlgorithmsBody HeightBody WeightElectronic Health RecordsAdultAgedFemaleHumansMaleMiddle AgedReference ValuesUnited StatesYoung AdultAll of Us Research ProgramData qualityElectronic Health RecordsMeasurement error

Identifiers

PMID38788889
PMCPMC11973958

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.