Evidence map›Paper›PMID 38786767›Full record

ArticleMetabolites2024

Accurate Prediction of

Tanvir Sajed, Zinat Sayeeda, Brian L Lee, Mark Berjanskii, Fei Wang, Vasuk Gautam, David S Wishart

Abstract read
In one paragraph

Article in Metabolites, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Unmasking DNA Resonances by Suppression of Hyperpolarized Water.Journal of the American Chemical Society · 2026
    Article
  3. Article
  4. Application of NMR to Large RNAs.Journal of molecular biology · 2025
    Review
  5. Review
  6. Article
  7. Review
  8. Computation ofJournal of molecular modeling · 2025
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tanvir SajedDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Zinat SayeedaDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Brian L LeeDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Mark BerjanskiiDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Fei WangDepartment of Computing Science, University of Alberta, Edmonton, AB T6G 2E8, Canada.
Vasuk GautamDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.ORCID 0000-0002-9204-1963
David S WishartDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.ORCID 0000-0002-3207-2434

Funding

NP-MRD: Natural Products Magnetic Resonance DatabaseU24AT010811 · NCCIH · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI CORT, JOHN R · 2020 to 2024
$4.1M
NCCIH NIH HHS U24 AT010811
6 · The paper itself

Abstract

NMR is widely considered the gold standard for organic compound structure determination. As such, NMR is routinely used in organic compound identification, drug metabolite characterization, natural product discovery, and the deconvolution of metabolite mixtures in biofluids (metabolomics and exposomics). In many cases, compound identification by NMR is achieved by matching measured NMR spectra to experimentally collected NMR spectral reference libraries. Unfortunately, the number of available experimental NMR reference spectra, especially for metabolomics, medical diagnostics, or drug-related studies, is quite small. This experimental gap could be filled by predicting NMR chemical shifts for known compounds using computational methods such as machine learning (ML). Here, we describe how a deep learning algorithm that is trained on a high-quality, "solvent-aware" experimental dataset can be used to predict

Indexed as

chemical shiftgraph neural networkmachine learningNMRpredictor

Identifiers

PMID38786767
PMCPMC11123270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.