Evidence map›Paper›PMID 38785536›Full record

ArticleCurrent issues in molecular biology2024

An Accurate Representation of the Number of bZIP Transcription Factors in the

Xin Liu, Selvakumar Sukumaran, Esteri Viitanen, Nupur Naik, Sameer Hassan, Henrik Aronsson

Abstract read
In one paragraph

Article in Current issues in molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xin LiuDepartment of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden.
Selvakumar SukumaranDepartment of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden.
Esteri ViitanenDepartment of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden.ORCID 0009-0004-0246-1342
Nupur NaikDepartment of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden.
Sameer HassanDepartment of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden.ORCID 0000-0002-2327-2645
Henrik AronssonDepartment of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden.ORCID 0000-0003-4424-8481

Funding

Carl Tryggers Foundation CTS 15:34, CTS 17:32, CTS 19:22Chinese Scholarship Council 202106910024Swedish Research Council 2021-04265
6 · The paper itself

Abstract

Climate change is dramatically increasing the overall area of saline soils around the world, which is increasing by approximately two million hectares each year. Soil salinity decreases crop yields and, thereby, makes farming less profitable, potentially causing increased poverty and hunger in many areas. A solution to this problem is increasing the salt tolerance of crop plants. Transcription factors (TFs) within crop plants represent a key to understanding salt tolerance, as these proteins play important roles in the regulation of functional genes linked to salt stress. The basic leucine zipper (bZIP) TF has a well-documented role in the regulation of salt tolerance. To better understand how bZIP TFs are linked to salt tolerance, we performed a genome-wide analysis in wheat using the Chinese spring wheat genome, which has been assembled by the International Wheat Genome Sequencing Consortium. We identified 89 additional bZIP gene sequences, which brings the total of bZIP gene sequences in wheat to 237. The majority of these 237 sequences included a single bZIP protein domain; however, different combinations of five other domains also exist. The bZIP proteins are divided into ten subfamily groups. Using an in silico analysis, we identified five bZIP genes (

Indexed as

BARI Gom-25bZIPsalinitysalt stresstranscription factorwheat

Identifiers

PMID38785536
PMCPMC11120151

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.