Evidence map›Paper›PMID 38783041›Full record

ArticleNPJ precision oncology2024

Acquired resistance to immunotherapy and chemoradiation in MYC amplified head and neck cancer.

Thomas F Cyberski, Alka Singh, Michael Korzinkin, Vasudha Mishra, Frank Pun, Le Shen, Claudia Wing, Xiangying Cheng, Brandon Baird, Yuxuan Miao and 12 more

Abstract read
In one paragraph

Article in NPJ precision oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  14. Epigenetic regulation of CD8Frontiers in immunology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Thomas F Cyberski *Pritzker School of Medicine, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-5774-3241
Alka Singh *Department of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-2273-3398
Michael Korzinkin *Insilico Medicine, Pak Shek Kok, Hong Kong.
Vasudha MishraDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.
Frank PunInsilico Medicine, Pak Shek Kok, Hong Kong.ORCID http://orcid.org/0000-0001-8801-6645
Le ShenDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Claudia WingDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.
Xiangying ChengDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.
Brandon BairdDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Yuxuan MiaoBen May Department for Cancer Research, University of Chicago, Chicago, IL, USA.
Moshe ElkabetsThe Shraga Segal Department of Microbiology, Immunology, and Genetics, Ben-Gurion University, Beer Sheva, Israel.ORCID http://orcid.org/0000-0001-7740-0473
Sara KochannyDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-3755-1175
Wenji GuoDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.
Emma DyerHarvard T.H. Chan School of Public Health, Cambridge, MA, USA.
Alexander T PearsonDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-2801-7456
Aditya JulooriDepartment of Radiation Oncology, University of Chicago, Chicago, IL, USA.
Mark LingenDepartment of Pathology, University of Chicago, Chicago, IL, USA.
Grayson ColeDepartment of Pathology, University of Chicago, Chicago, IL, USA.
Alex ZhavoronkovInsilico Medicine, Pak Shek Kok, Hong Kong.ORCID http://orcid.org/0000-0001-7067-8966
Nishant AgrawalDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Evgeny IzumchenkoDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA. izumchen@uchicago.edu.ORCID http://orcid.org/0000-0003-3500-5664
Ari J RosenbergDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, USA. arirosenberg@uchicago.edu.ORCID http://orcid.org/0000-0001-5908-0939

Funding

Delineating chromatin-related gene expression signatures as a function of HNSCC progressionR01DE027809 · NIDCR · UNIVERSITY OF MARYLAND BALTIMORE · PI GAYKALOVA, DARIA A, IZUMCHENKO, EVGENY (EUGENE) G · 2019 to 2023
$2.6M
Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral PremalignancyR01DE028674 · NIDCR · UNIVERSITY OF CHICAGO · PI AGRAWAL, NISHANT, LINGEN, MARK W. · 2020 to 2024
$1.9M
PDCD10 as a novel driver for head and neck squamous cell carcinoma developmentR21DE032833 · NIDCR · UNIVERSITY OF CHICAGO · PI IZUMCHENKO, EVGENY (EUGENE) G, SHEN, LE · 2023 to 2024
$451k
NIDCR NIH HHS R01 DE027809NIDCR NIH HHS R01 DE028674NIDCR NIH HHS R21 DE032833U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01DE027809U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01DE028674U.S. Department of Health & Human Services | National Institutes of Health (NIH) R21DE032833
6 · The paper itself

Abstract

The proto-oncogene MYC encodes a nuclear transcription factor that has an important role in a variety of cellular processes, such as cell cycle progression, proliferation, metabolism, adhesion, apoptosis, and therapeutic resistance. MYC amplification is consistently observed in aggressive forms of several solid malignancies and correlates with poor prognosis and distant metastases. While the tumorigenic effects of MYC in patients with head and neck squamous cell carcinoma (HNSCC) are well known, the molecular mechanisms by which the amplification of this gene may confer treatment resistance, especially to immune checkpoint inhibitors, remains under-investigated. Here we present a unique case of a patient with recurrent/metastatic (R/M) HNSCC who, despite initial response to nivolumab-based treatment, developed rapidly progressive metastatic disease after the acquisition of MYC amplification. We conducted comparative transcriptomic analysis of this patient's tumor at baseline and upon progression to interrogate potential molecular processes through which MYC may confer resistance to immunotherapy and/or chemoradiation and used TCGA-HNSC dataset and an institutional cohort to further explore clinicopathologic features and key molecular networks associated with MYC amplification in HNSCC. This study highlights MYC amplification as a potential mechanism of immune checkpoint inhibitor resistance and suggest its use as a predictive biomarker and potential therapeutic target in R/M HNSCC.

Identifiers

PMID38783041
PMCPMC11116544

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.