Evidence map›Paper›PMID 38782973›Full record

ArticleScientific reports2024

Characterizing the human intestinal chondroitin sulfate glycosaminoglycan sulfation signature in inflammatory bowel disease.

Kendra L Francis, Hengqi B Zheng, David L Suskind, Taylor A Murphree, Bao Anh Phan, Emily Quah, Aarun S Hendrickson, Xisheng Zhou, Mason Nuding, Alexandra S Hudson and 5 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Kendra L FrancisDepartment of Pediatric Gastroenterology and Hepatology, Seattle Children's Hospital, Seattle, WA, USA.
Hengqi B ZhengDepartment of Pediatric Gastroenterology and Hepatology, Seattle Children's Hospital, Seattle, WA, USA.
David L SuskindDepartment of Pediatric Gastroenterology and Hepatology, Seattle Children's Hospital, Seattle, WA, USA.
Taylor A MurphreeDepartment of Medicinal Chemistry, University of Washington, Seattle, WA, USA.
Bao Anh PhanDepartment of Medicine, University of Washington Medicine Diabetes Institute, 750 Republican St, Box 358062, Seattle, WA, 98195, USA.
Emily QuahDepartment of Medicine, University of Washington Medicine Diabetes Institute, 750 Republican St, Box 358062, Seattle, WA, 98195, USA.
Aarun S HendricksonDepartment of Medicine, University of Washington Medicine Diabetes Institute, 750 Republican St, Box 358062, Seattle, WA, 98195, USA.
Xisheng ZhouDepartment of Medicinal Chemistry, University of Washington, Seattle, WA, USA.
Mason NudingDepartment of Pediatric Gastroenterology and Hepatology, Seattle Children's Hospital, Seattle, WA, USA.
Alexandra S HudsonDepartment of Pediatric Gastroenterology and Hepatology, Seattle Children's Hospital, Seattle, WA, USA.
Miklos GuttmanDepartment of Medicinal Chemistry, University of Washington, Seattle, WA, USA.
Gregory J MortonDepartment of Medicine, University of Washington Medicine Diabetes Institute, 750 Republican St, Box 358062, Seattle, WA, 98195, USA.
Michael W SchwartzDepartment of Medicine, University of Washington Medicine Diabetes Institute, 750 Republican St, Box 358062, Seattle, WA, 98195, USA.
Kimberly M AlongeDepartment of Medicine, University of Washington Medicine Diabetes Institute, 750 Republican St, Box 358062, Seattle, WA, 98195, USA.
Jarrad M ScarlettDepartment of Pediatric Gastroenterology and Hepatology, Seattle Children's Hospital, Seattle, WA, USA. jarrad.scarlett@seattlechildrens.org.

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Sakeneh Zraika · 1986 to 2026
$41.4M
PILOT STUDY--CLINICAL NUTRITION RESEARCHP30DK035816 · NIDDK · UNIVERSITY OF WASHINGTON · PI GREGORY J MORTON · 1986 to 2026
$30.4M
Novel Brain Mechanisms Controlling Glucose HomeostasisR01DK083042 · NIDDK · UNIVERSITY OF WASHINGTON · PI SCHWARTZ, MICHAEL W · 2008 to 2025
$7.6M
Neuroendocrine Control of Glucose MetabolismR01DK089056 · NIDDK · UNIVERSITY OF WASHINGTON · PI MORTON, GREGORY J · 2011 to 2024
$5.6M
Maternal immune activation remodeling of offspring glycosaminoglycan sulfation patterns during neurodevelopmentDP2AI171150 · NIAID · UNIVERSITY OF WASHINGTON · PI Kimberly Michele Alonge · 2023 to 2026
$2.0M
Novel Anti-Diabetic Actions of Hypothalamic FGF19-FGFR1 SignalingR01DK101997 · NIDDK · UNIVERSITY OF WASHINGTON · PI SCHWARTZ, MICHAEL W · 2014 to 2018
$1.9M
Hybrid structural mass spectrometry for rapid site-specific glycan structural elucidationR01GM127579 · NIGMS · UNIVERSITY OF WASHINGTON · PI GUTTMAN, MIKLOS · 2018 to 2021
$1.7M
Central and Peripheral Mechanisms of FGF1-Mediated Remission of Diabetic HyperglycemiaK08DK114474 · NIDDK · UNIVERSITY OF WASHINGTON · PI SCARLETT, JARRAD M · 2017 to 2021
$813k
MALDI imaging of glial scar-forming glycans in Alzheimers diseaseR21AG074152 · NIA · UNIVERSITY OF WASHINGTON · PI ALONGE, KIMBERLY MICHELE · 2021 to 2022
$485k
Mechanisms underlying exacerbation of inflammatory bowel disease by diabetesF32DK131695 · NIDDK · UNIVERSITY OF WASHINGTON · PI FRANCIS-STREAM, KENDRA LEIGH · 2022 to 2023
$152k
National Institute of Allergy and Infectious Diseases AI171150NIAID NIH HHS DP2 AI171150NIA NIH HHS R21 AG074152NIDDK NIH HHS DK017047NIDDK NIH HHS DK089056NIDDK NIH HHS DK101997NIDDK NIH HHS DK114474NIDDK NIH HHS DK131695NIDDK NIH HHS F32 DK131695NIDDK NIH HHS K08 DK114474NIDDK NIH HHS P30 DK017047NIDDK NIH HHS P30 DK035816NIDDK NIH HHS R01 DK083042NIDDK NIH HHS R01 DK089056NIDDK NIH HHS R01 DK101997NIGMS NIH HHS R01 GM127579Office of Research Central, University of Washington A139339U.S. Department of Defense W81XWH2110635
6 · The paper itself

Abstract

The intestinal extracellular matrix (ECM) helps maintain appropriate tissue barrier function and regulate host-microbial interactions. Chondroitin sulfate- and dermatan sulfate-glycosaminoglycans (CS/DS-GAGs) are integral components of the intestinal ECM, and alterations in CS/DS-GAGs have been shown to significantly influence biological functions. Although pathologic ECM remodeling is implicated in inflammatory bowel disease (IBD), it is unknown whether changes in the intestinal CS/DS-GAG composition are also linked to IBD in humans. Our aim was to characterize changes in the intestinal ECM CS/DS-GAG composition in intestinal biopsy samples from patients with IBD using mass spectrometry. We characterized intestinal CS/DS-GAGs in 69 pediatric and young adult patients (n = 13 control, n = 32 active IBD, n = 24 IBD in remission) and 6 adult patients. Here, we report that patients with active IBD exhibit a significant decrease in the relative abundance of CS/DS isomers associated with matrix stability (CS-A and DS) compared to controls, while isomers implicated in matrix instability and inflammation (CS-C and CS-E) were significantly increased. This imbalance of intestinal CS/DS isomers was restored among patients in clinical remission. Moreover, the abundance of pro-stabilizing CS/DS isomers negatively correlated with clinical disease activity scores, whereas both pro-inflammatory CS-C and CS-E content positively correlated with disease activity scores. Thus, pediatric patients with active IBD exhibited increased pro-inflammatory and decreased pro-stabilizing CS/DS isomer composition, and future studies are needed to determine whether changes in the CS/DS-GAG composition play a pathogenic role in IBD.

Indexed as

Chondroitin SulfatesGlycosaminoglycansInflammatory Bowel DiseasesAdolescentAdultChildExtracellular MatrixFemaleHumansIntestinal MucosaIntestinesMaleYoung Adultchondroitin sulfate glycosaminoglycanChondroitin SulfatesGlycosaminoglycans

Identifiers

PMID38782973
PMCPMC11116513

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.