Evidence map›Paper›PMID 38781449›Full record

ArticleThe Journal of infectious diseases2025

Fecal Microbiota and Volatile Metabolome Pattern Alterations Precede Late-Onset Meningitis in Preterm Neonates.

Nina M Frerichs, Nancy Deianova, Sofia El Manouni El Hassani, Animesh Acharjee, Mohammed Nabil Quraishi, Willem P de Boode, Veerle Cossey, Christian V Hulzebos, Anton H van Kaam, Boris W Kramer and 12 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors.

Nina M FrerichsDepartment of Pediatric Gastroenterology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Nancy DeianovaDepartment of Pediatric Gastroenterology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0000-0002-3568-863X
Sofia El Manouni El HassaniDepartment of Pediatric Gastroenterology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0009-0008-0088-8544
Animesh AcharjeeCollege of Medical and Dental Sciences, Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom.ORCID 0000-0002-2806-444X
Mohammed Nabil QuraishiInstitute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom.
Willem P de BoodeNeonatal Intensive Care Unit, Radboud University Medical Center, Radboud Institute for Health Sciences, Amalia Children's Hospital, Nijmegen, The Netherlands.ORCID 0000-0003-2735-7010
Veerle CosseyNeonatal Intensive Care Unit, University Hospitals Leuven, Leuven, Belgium.ORCID 0000-0003-3194-7005
Christian V HulzebosNeonatal Intensive Care Unit, Beatrix Children's Hospital, University Medical Center Groningen, Groningen, The Netherlands.ORCID 0000-0001-6900-1974
Anton H van KaamAmsterdam Reproduction and Development Research Institute, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Boris W KramerDepartment of Pediatrics, Maastricht University Medical Center, Maastricht, The Netherlands.
Esther d'HaensNeonatal Intensive Care Unit, Amalia Children's Center, Isala, Zwolle, The Netherlands.
Wouter J de JongeTytgat Institute for Liver and Intestinal Research, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0000-0002-8159-7501
Daniel C VijlbriefNeonatal Intensive Care Unit, Wilhelmina Children's Hospital, University Medical Center Utrecht, Utrecht, The Netherlands.ORCID 0000-0002-3241-1547
Mirjam M van WeissenbruchDepartment of Neonatology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0000-0002-2682-7386
Emma DaultonSchool of Engineering, University of Warwick, Coventry, United Kingdom.
Alfian N WicaksonoSchool of Engineering, University of Warwick, Coventry, United Kingdom.ORCID 0000-0002-8086-9552
James A CovingtonSchool of Engineering, University of Warwick, Coventry, United Kingdom.ORCID 0000-0003-0425-1678
Marc A BenningaDepartment of Pediatric Gastroenterology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Nanne K H de BoerAmsterdam Gastroenterology Endocrinology Metabolism Research Institute, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0000-0003-1307-6488
Johannes B van GoudoeverDepartment of Pediatric Gastroenterology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0000-0001-8357-9887
Hendrik J NiemarktNeonatal Intensive Care Unit, Máxima Medical Center, Veldhoven, The Netherlands.ORCID 0000-0002-0844-7208
Tim G J de MeijDepartment of Pediatric Gastroenterology, Emma Children's Hospital, Amsterdam University Medical Center, Amsterdam, The Netherlands.ORCID 0000-0002-7556-5896

Funding

European Union Horizon 2020 814168Stichting Zeldzame Ziekten Fonds
6 · The paper itself

Abstract

backgroundThe fecal microbiota and metabolome are hypothesized to be altered before late-onset neonatal meningitis (LOM), analogous to late-onset sepsis (LOS). The present study aimed to identify fecal microbiota composition and volatile metabolomics preceding LOM.

methodsCases and gestational age-matched controls were selected from a prospective, longitudinal preterm cohort study (born <30 weeks' gestation) at 9 neonatal intensive care units. The microbial composition (16S rRNA sequencing) and volatile metabolome (gas chromatography-ion mobility spectrometry [GC-IMS] and GC-time-of-flight-mass spectrometry [GC-TOF-MS]) were analyzed in fecal samples 1-10 days pre-LOM.

resultsOf 1397 included infants, 21 were diagnosed with LOM (1.5%), and 19 with concomitant LOS (90%). Random forest classification and MaAsLin2 analysis found similar microbiota features contribute to the discrimination of fecal pre-LOM samples versus controls. A random forest model based on 6 microbiota features accurately predicted LOM 1-3 days before diagnosis with an area under the curve (AUC) of 0.88 (n = 147). Pattern recognition analysis by GC-IMS revealed an AUC of 0.70-0.76 (P < .05) in the 3 days pre-LOM (n = 92). No single discriminative metabolites were identified by GC-TOF-MS (n = 66).

conclusionsInfants with LOM could be accurately discriminated from controls based on preclinical microbiota composition, while alterations in the volatile metabolome were moderately associated with preclinical LOM.

Indexed as

FecesGastrointestinal MicrobiomeMetabolomeCase-Control StudiesFemaleGas Chromatography-Mass SpectrometryHumansInfant, NewbornInfant, PrematureLongitudinal StudiesMaleProspective StudiesRNA, Ribosomal, 16SRNA, Ribosomal, 16Sfecal biomarkerlate-onset meningitismicrobiota analysispreterm neonatesvolatile organic compounds

Identifiers

PMID38781449
PMCPMC12247813

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.