Evidence map›Paper›PMID 38781326›Full record

ArticleScience advances2024

A global gene regulatory program and its region-specific regulator partition neurons into commissural and ipsilateral projection types.

Aki Masuda, Kazuhiko Nishida, Rieko Ajima, Yumiko Saga, Marah Bakhtan, Avihu Klar, Tatsumi Hirata, Yan Zhu

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Gene expression programs underlying spinal commissural neuron differentiation and axon growth across the midline.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Spinal circuits encode a map of the trunk to control skin twitches.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Ontogeny of the spinal cord dorsal horn.Science (New York, N.Y.) · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Aki MasudaNational Institute of Genetics, Graduate University for Advanced Studies, Sokendai, Yata 1111, Mishima, Shizuoka 411-8540, Japan.ORCID 0009-0001-3562-0168
Kazuhiko NishidaDepartment of Medical Chemistry, Kansai Medical University, Hirakata, Osaka 573-1010, Japan.ORCID 0000-0001-8825-8441
Rieko AjimaNational Institute of Genetics, Graduate University for Advanced Studies, Sokendai, Yata 1111, Mishima, Shizuoka 411-8540, Japan.
Yumiko SagaNational Institute of Genetics, Graduate University for Advanced Studies, Sokendai, Yata 1111, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0001-9198-5164
Marah BakhtanDepartment of Medical Neurobiology, IMRIC, Hebrew University - Hadassah Medical School, Jerusalem, Israel.ORCID 0009-0006-7907-760X
Avihu KlarDepartment of Medical Neurobiology, IMRIC, Hebrew University - Hadassah Medical School, Jerusalem, Israel.ORCID 0000-0002-9248-2179
Tatsumi HirataNational Institute of Genetics, Graduate University for Advanced Studies, Sokendai, Yata 1111, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0001-5218-2959
Yan ZhuNational Institute of Genetics, Graduate University for Advanced Studies, Sokendai, Yata 1111, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0002-8237-7623

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the genetic programs that drive neuronal diversification into classes and subclasses is key to understand nervous system development. All neurons can be classified into two types: commissural and ipsilateral, based on whether their axons cross the midline or not. However, the gene regulatory program underlying this binary division is poorly understood. We identified a pair of basic helix-loop-helix transcription factors, Nhlh1 and Nhlh2, as a global transcriptional mechanism that controls the laterality of all floor plate-crossing commissural axons in mice. Mechanistically, Nhlh1/2 play an essential role in the expression of Robo3, the key guidance molecule for commissural axon projections. This genetic program appears to be evolutionarily conserved in chick. We further discovered that Isl1, primarily expressed in ipsilateral neurons within neural tubes, negatively regulates the Robo3 induction by Nhlh1/2. Our findings elucidate a gene regulatory strategy where a conserved global mechanism intersects with neuron class-specific regulators to control the partitioning of neurons based on axon laterality.

Indexed as

Basic Helix-Loop-Helix ProteinsGene Expression Regulation, DevelopmentalNeuronsAnimalsAxonsChick EmbryoGene Regulatory NetworksLIM-Homeodomain ProteinsMiceNerve Tissue ProteinsTranscription FactorsBasic Helix-Loop-Helix Proteinsinsulin gene enhancer binding protein Isl-1LIM-Homeodomain ProteinsNerve Tissue ProteinsTranscription Factors

Identifiers

PMID38781326
PMCPMC11114196

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.