Evidence map›Paper›PMID 38781211›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Foraging mechanisms in excavate flagellates shed light on the functional ecology of early eukaryotes.

Sei Suzuki-Tellier, Federica Miano, Seyed Saeed Asadzadeh, Alastair G B Simpson, Thomas Kiørboe

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Quantifying the fitness contribution of phagocytosis.bioRxiv : the preprint server for biology · 2025
    Article
  5. The fluid dynamics and functional diversity of the flagella of free-living flagellates.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Review
  6. Form and function in biological filaments: a physicist's review.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Review
  7. A diverse Palaeoproterozoic microbial ecosystem implies early eukaryogenesis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sei Suzuki-Tellier *Centre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Kgs Lyngby 2800, Denmark.ORCID 0000-0001-6955-8684
Federica Miano *Centre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Kgs Lyngby 2800, Denmark.ORCID 0000-0001-5034-0132
Seyed Saeed AsadzadehCentre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Kgs Lyngby 2800, Denmark.
Alastair G B SimpsonDepartment of Biology, Centre for Comparative Genomics and Evolutionary Bioinformatics, Dalhousie University, Halifax NS B3H 4R2, Canada.ORCID 0000-0002-4133-1709
Thomas KiørboeCentre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Kgs Lyngby 2800, Denmark.ORCID 0000-0002-3265-336X

Funding

Carlsbergfondet (Carlsberg Foundation) CF17-0495EC | H2020 | PRIORITY 'Excellent science' | H2020 Marie Skłodowska-Curie Actions (MSCA) 955910Independent research fund Denmark 7014-00033BSimons Foundation (SF) 931976
6 · The paper itself

Abstract

The phagotrophic flagellates described as "typical excavates" have been hypothesized to be morphologically similar to the Last Eukaryotic Common Ancestor and understanding the functional ecology of excavates may therefore help shed light on the ecology of these early eukaryotes. Typical excavates are characterized by a posterior flagellum equipped with a vane that beats in a ventral groove. Here, we combined flow visualization and observations of prey capture in representatives of the three clades of excavates with computational fluid dynamic modeling, to understand the functional significance of this cell architecture. We record substantial differences amongst species in the orientation of the vane and the beat plane of the posterior flagellum. Clearance rate magnitudes estimated from flow visualization and modeling are both like that of other similarly sized flagellates. The interaction between a vaned flagellum beating in a confinement is modeled to produce a very efficient feeding current at low energy costs, irrespective of the beat plane and vane orientation and of all other morphological variations. Given this predicted uniformity of function, we suggest that the foraging systems of typical excavates studied here may be good proxies to understand those potentially used by our distant ancestors more than 1 billion years ago.

Indexed as

FlagellaAnimalsBiological EvolutionEukaryotaHydrodynamicsModels, Biologicalclearance rateearly eukaryotic evolutionfeeding currentprey capturevane-bearing flagella

Identifiers

PMID38781211
PMCPMC11145212

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.