Evidence map›Paper›PMID 38781207›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Advanced surface passivation for high-sensitivity studies of biomolecular condensates.

Run-Wen Yao, Michael K Rosen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  15. Advanced surface passivation for high-sensitivity studies of biomolecular condensates.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Run-Wen YaoDepartment of Biophysics, HHMI, University of Texas Southwestern Medical Center, Dallas, TX 75390.ORCID 0000-0002-6183-0273
Michael K RosenDepartment of Biophysics, HHMI, University of Texas Southwestern Medical Center, Dallas, TX 75390.ORCID 0000-0002-0775-7917

Funding

UT Southwestern Medical Center Simmons Comprehensive Cancer CenterP30CA142543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI MELANIE H. COBB · 2010 to 2026
$53.7M
F. Andrew Bell Chair in Biochemistry NoneHHS | NIH | National Cancer Institute (NCI) 1P30 CA142543-0Howard Hughes Medical Institute (HHMI) NoneNCI NIH HHS P30 CA142543Welch Foundation (The Welch Foundation) I-1544
6 · The paper itself

Abstract

Biomolecular condensates are cellular compartments that concentrate biomolecules without an encapsulating membrane. In recent years, significant advances have been made in the understanding of condensates through biochemical reconstitution and microscopic detection of these structures. Quantitative visualization and biochemical assays of biomolecular condensates rely on surface passivation to minimize background and artifacts due to condensate adhesion. However, the challenge of undesired interactions between condensates and glass surfaces, which can alter material properties and impair observational accuracy, remains a critical hurdle. Here, we introduce an efficient, broadly applicable, and simple passivation method employing self-assembly of the surfactant Pluronic F127 (PF127). The method greatly reduces nonspecific binding across a range of condensates systems for both phase-separated droplets and biomolecules in dilute phase. Additionally, by integrating PF127 passivation with the Biotin-NeutrAvidin system, we achieve controlled multipoint attachment of condensates to surfaces. This not only preserves condensate properties but also facilitates long-time fluorescence recovery after photobleaching imaging and high-precision single-molecule analyses. Using this method, we have explored the dynamics of polySIM molecules within polySUMO/polySIM condensates at the single-molecule level. Our observations suggest a potential heterogeneity in the distribution of available polySIM-binding sites within the condensates.

Indexed as

AvidinBiomolecular CondensatesBiotinPoloxamerFluorescence Recovery After PhotobleachingSingle Molecule ImagingSurface-Active AgentsSurface PropertiesAvidinBiotinneutravidinPoloxamerSurface-Active Agentsbiomolecular condensatephase separationself-assemblysingle-molecule imagingsurface passivation

Identifiers

PMID38781207
PMCPMC11145189

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.