Evidence map›Paper›PMID 38781204›Full record

ArticlePloS one2024

Species-specific dynamics may cause deviations from general biogeographical predictions - evidence from a population genomics study of a New Guinean endemic passerine bird family (Melampittidae).

Ingo A Müller, Filip Thörn, Samyuktha Rajan, Per G P Ericson, John P Dumbacher, Gibson Maiah, Mozes P K Blom, Knud A Jønsson, Martin Irestedt

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ingo A MüllerDepartment of Zoology, Division of Systematics and Evolution, Stockholm University, Stockholm, Sweden.ORCID 0000-0002-8812-9313
Filip ThörnDepartment of Zoology, Division of Systematics and Evolution, Stockholm University, Stockholm, Sweden.ORCID 0000-0002-8173-7877
Samyuktha RajanDepartment of Zoology, Division of Ethology, Stockholm University, Stockholm, Sweden.
Per G P EricsonDepartment of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.ORCID 0000-0002-4143-9998
John P DumbacherDepartment of Ornithology and Mammalogy, California Academy of Sciences, San Francisco, CA, United States of America.ORCID 0000-0001-8942-1554
Gibson MaiahNew Guinea Binatang Research Center, Madang, Papua New Guinea.
Mozes P K BlomLeibniz Institut für Evolutions- und Biodiversitätsforschung, Museum für Naturkunde, Berlin, Germany.
Knud A JønssonDepartment of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.
Martin IrestedtDepartment of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The family Melampittidae is endemic to New Guinea and consists of two monotypic genera: Melampitta lugubris (Lesser Melampitta) and Megalampitta gigantea (Greater Melampitta). Both Melampitta species have scattered and disconnected distributions across New Guinea in the central mountain range and in some of the outlying ranges. While M. lugubris is common and found in most montane regions of the island, M. gigantaea is elusive and known from only six localities in isolated pockets on New Guinea with very specific habitats of limestone and sinkholes. In this project, we apply museomics to determine the population structure and demographic history of these two species. We re-sequenced the genomes of all seven known M. gigantaea samples housed in museum collections as well as 24 M. lugubris samples from across its distribution. By comparing population structure between the two species, we investigate to what extent habitat dependence, such as in M. gigantaea, may affect population connectivity. Phylogenetic and population genomic analyses, as well as acoustic variation revealed that M. gigantaea consists of a single population in contrast to M. lugubris that shows much stronger population structure across the island. We suggest a recent collapse of M. gigantaea into its fragmented habitats as an explanation to its unexpected low diversity and lack of population structure. The deep genetic divergences between the M. lugubris populations on the Vogelkop region, in the western central range and the eastern central range, respectively, suggests that these three populations should be elevated to full species level. This work sheds new light on the mechanisms that have shaped the intriguing distribution of the two species within this family and is a prime example of the importance of museum collections for genomic studies of poorly known and rare species.

Indexed as

PasseriformesAnimalsEcosystemGenetics, PopulationGenomeNew GuineaPhylogenyPhylogeographySpecies Specificity

Identifiers

PMID38781204
PMCPMC11115331

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.