Evidence map›Paper›PMID 38779483›Full record

ArticleiScience2024

Ribosome profiling reveals the role of yeast RNA-binding proteins Cth1 and Cth2 in translational regulation.

Hanna Barlit, Antonia M Romero, Ali Gülhan, Praveen K Patnaik, Alexander Tyshkovskiy, María T Martínez-Pastor, Vadim N Gladyshev, Sergi Puig, Vyacheslav M Labunskyy

Abstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hanna BarlitDepartment of Dermatology, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA.
Antonia M RomeroDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Valencia, Spain.
Ali GülhanDepartment of Dermatology, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA.
Praveen K PatnaikDepartment of Dermatology, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA.
Alexander TyshkovskiyDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
María T Martínez-PastorDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Valencia, Spain.
Vadim N GladyshevDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Sergi PuigDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Valencia, Spain.
Vyacheslav M LabunskyyDepartment of Dermatology, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA.

Funding

Molecular mechanisms of translational regulation in agingR01AG058713 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LABUNSKYY, VYACHESLAV M · 2019 to 2023
$2.9M
The role of iron homeostasis in agingR56AG066704 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LABUNSKYY, VYACHESLAV M · 2021 to 2021
$338k
NIA NIH HHS R01 AG058713NIA NIH HHS R56 AG066704
6 · The paper itself

Abstract

Iron serves as a cofactor for enzymes involved in several steps of protein translation, but the control of translation during iron limitation is not understood at the molecular level. Here, we report a genome-wide analysis of protein translation in response to iron deficiency in yeast using ribosome profiling. We show that iron depletion affects global protein synthesis and leads to translational repression of multiple genes involved in iron-related processes. Furthermore, we demonstrate that the RNA-binding proteins Cth1 and Cth2 play a central role in this translational regulation by repressing the activity of the iron-dependent Rli1 ribosome recycling factor and inhibiting mitochondrial translation and heme biosynthesis. Additionally, we found that iron deficiency represses

Indexed as

Molecular biologyTranscriptomics

Identifiers

PMID38779483
PMCPMC11109004

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.