Evidence map›Paper›PMID 38778723›Full record

ArticleMolecular genetics & genomic medicine2024

A new genetic diagnosis strategy for paroxysmal kinesigenic dyskinesia: Targeted high-throughput detection of PRRT2 gene c.649 locus.

Min Wen, Hui Huang, Fei Huang, Ru Xu, Jing Zhang, Jia-Geng Fan, Jun Zeng, Kai-Wen Jiang, Ding Liu, Hua-Lin Huang and 1 more

Abstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Min WenDepartment of Pediatrics, The Third Xiangya Hospital, Central South University, Changsha, Hunan, China.
Hui HuangDepartment of Medical Genetics, Hunan Province Clinical Research Center for Genetic Birth Defects and Rare Diseases, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Fei HuangReproductive Medicine Center, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Ru XuReproductive Medicine Center, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Jing ZhangReproductive Medicine Center, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Jia-Geng FanHangzhou Xiangyin Medical Laboratory, Hangzhou, Zhejiang, China.
Jun ZengReproductive Medicine Center, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Kai-Wen JiangReproductive Medicine Center, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Ding LiuDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, Hunan, China.
Hua-Lin HuangReproductive Medicine Center, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Qing-Nan HeDepartment of Pediatrics, The Third Xiangya Hospital, Central South University, Changsha, Hunan, China.ORCID https://orcid.org/0000-0001-5229-9583

Funding

Fundamental Research Funds for Central Universities of the Central South University CX20230378the National Key Research and Development Program of China 2022YFC2505203the Science and Technology Innovation Program of Hunan Province 2021RC3031the Scientific research program of Hunan Provincial Health Commission 202205033471
6 · The paper itself

Abstract

backgroundParoxysmal kinesigenic dyskinesia (PKD) is the most prevalent kind type of paroxysmal Dyskinesia, characterized by recurrent and transient episodes of involuntary movements. Most PKD cases were attributed to the proline-rich transmembrane protein 2 (PRRT2) gene, in which the c.649 region is a hotspot for known mutations. Even though some patients with PKD have been genetically diagnosed using whole-exome sequencing (WES) and Sanger sequencing, there are still cases of missed diagnoses due to the limitations of sequencing technology and analytic methods on throughput.

methodsPatients meeting the diagnosis criteria of PKD with negative results of PRRT2-Sanger sequencing and WES were included in this study. Mutation screening and targeted high-throughput sequencing were performed to analyze and verify the sequencing results of the potential mutations.

resultsSix patients with PKD with high mutation ratios of c.649dupC were screened using our targeted high-throughput sequencing from 26 PKD patients with negative results of PRRT2-Sanger sequencing and WES (frequency = 23.1%), which compensated for the comparatively shallow sequencing depth and statistical flaws in this region. Compared with the local normal population and other patients with PKD, the mutation ratios of c.649dupC of these six patients with PKD were much higher and also had truncated protein structures and differentially altered mRNA expression.

conclusionBased on the above studies, we emphasize the routine targeted high-throughput sequencing of the c.649 site in the PRRT2 gene in so-called genetic-testing-negative patients with PKD, and manually calculate the deletion and duplication mutations depth and ratios to lower the rate of clinical misdiagnosis.

Indexed as

DystoniaGenetic TestingMembrane ProteinsNerve Tissue ProteinsAdolescentAdultChildChild, PreschoolExome SequencingFemaleHigh-Throughput Nucleotide SequencingHumansMaleMutationMembrane ProteinsNerve Tissue ProteinsPRRT2 protein, humanc.649 locusparoxysmal kinesigenic dyskinesiaPRRT2targeted high‐throughput detection

Identifiers

PMID38778723
PMCPMC11112295

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.