Evidence map›Paper›PMID 38778414›Full record

ArticleRetrovirology2024

HIV-1 with gag processing defects activates cGAS sensing.

Rebecca P Sumner, Henry Blest, Meiyin Lin, Carlos Maluquer de Motes, Greg J Towers

Abstract read
In one paragraph

Article in Retrovirology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rebecca P SumnerDivision of Infection and Immunity, University College London, 90 Gower Street, London, WC1E 6BT, UK. rebecca.sumner@surrey.ac.uk.
Henry BlestDivision of Infection and Immunity, University College London, 90 Gower Street, London, WC1E 6BT, UK.
Meiyin LinDivision of Infection and Immunity, University College London, 90 Gower Street, London, WC1E 6BT, UK.
Carlos Maluquer de MotesDepartment of Microbial Sciences, University of Surrey, Guildford, GU2 7XH, UK.
Greg J TowersDivision of Infection and Immunity, University College London, 90 Gower Street, London, WC1E 6BT, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/T006501/1European Research Council FP7/2007-2013Medical Research Council G0801172Medical Research Council MR/S023380/1Wellcome TrustWellcome Trust 108183
6 · The paper itself

Abstract

backgroundDetection of viruses by host pattern recognition receptors induces the expression of type I interferon (IFN) and IFN-stimulated genes (ISGs), which suppress viral replication. Numerous studies have described HIV-1 as a poor activator of innate immunity in vitro. The exact role that the viral capsid plays in this immune evasion is not fully understood.

resultsTo better understand the role of the HIV-1 capsid in sensing we tested the effect of making HIV-1 by co-expressing a truncated Gag that encodes the first 107 amino acids of capsid fused with luciferase or GFP, alongside wild type Gag-pol. We found that unlike wild type HIV-1, viral particles produced with a mixture of wild type and truncated Gag fused to luciferase or GFP induced a potent IFN response in THP-1 cells and macrophages. Innate immune activation by Gag-fusion HIV-1 was dependent on reverse transcription and DNA sensor cGAS, suggesting activation of an IFN response by viral DNA. Further investigation revealed incorporation of the Gag-luciferase/GFP fusion proteins into viral particles that correlated with subtle defects in wild type Gag cleavage and a diminished capacity to saturate restriction factor TRIM5α, likely due to aberrant particle formation. We propose that expression of the Gag fusion protein disturbs the correct cleavage and maturation of wild type Gag, yielding viral particles that are unable to effectively shield viral DNA from detection by innate sensors including cGAS.

conclusionsThese data highlight the crucial role of capsid in innate evasion and support growing literature that disruption of Gag cleavage and capsid formation induces a viral DNA- and cGAS-dependent innate immune response. Together these data demonstrate a protective role for capsid and suggest that antiviral activity of capsid-targeting antivirals may benefit from enhanced innate and adaptive immunity in vivo.

Indexed as

gag Gene Products, Human Immunodeficiency VirusHIV-1Immunity, InnateNucleotidyltransferasesAntiviral Restriction FactorsCapsidCarrier ProteinsCell LineCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDNA, ViralHost-Pathogen InteractionsHumansImmune EvasionMacrophagesTHP-1 CellsTripartite Motif ProteinsAntiviral Restriction FactorsCarrier ProteinscGAS protein, humanCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDNA, Viralgag Gene Products, Human Immunodeficiency VirusNucleotidyltransferasesTRIM5 protein, humanTripartite Motif ProteinsUbiquitin-Protein LigasesCapsidcGASDNA sensingHIV-1Interferon

Identifiers

PMID38778414
PMCPMC11112816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.