Evidence map›Paper›PMID 38778352›Full record

ArticleVirology journal2024

First report of molecular epidemiology and phylogenetic characteristics of feline herpesvirus (FHV-1) from naturally infected cats in Kunshan, China.

Semin Kim, Yixi Cheng, Zhenkun Fang, Qiu Zhongqi, Yu Weidong, Aysun Yilmaz, Huseyin Yilmaz, Sajid Umar

Abstract read
In one paragraph

Article in Virology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Semin KimGlobal Health Research Center (GHRC), Duke Kunshan University, No. 8 Duke Ave, 215316, Kunshan, China.
Yixi ChengGlobal Health Research Center (GHRC), Duke Kunshan University, No. 8 Duke Ave, 215316, Kunshan, China.
Zhenkun FangGlobal Health Research Center (GHRC), Duke Kunshan University, No. 8 Duke Ave, 215316, Kunshan, China.
Qiu ZhongqiSimba Pet Hospital (Tinglin Park branch), Maanshan road, Kunshan, Suzhou, 215335, Jiangsu Province, China.
Yu WeidongPlay Pi Kangkang Pet Hospital, Kunshan City Development Zone, Kunshan, Suzhou, 215300, Jiangsu Province, China.
Aysun YilmazDepartment of Virology, Veterinary Faculty, Istanbul University-Cerrahpasa, Büyükcekmece, 35500, Istanbul, Türkiye.
Huseyin YilmazDepartment of Virology, Veterinary Faculty, Istanbul University-Cerrahpasa, Büyükcekmece, 35500, Istanbul, Türkiye.
Sajid UmarGlobal Health Research Center (GHRC), Duke Kunshan University, No. 8 Duke Ave, 215316, Kunshan, China. sajid.umar@dukekunshan.edu.cn.

Funding

Kunshan Municipal Government research funding 23KKSGR032
6 · The paper itself

Abstract

backgroundFeline herpesvirus type 1 (FHV-1) is a life threatening highly contagious virus in cats and typically causes upper respiratory tract infections as well as conjunctival and corneal ulcers. Genetic variability could alter the severity of diseases and clinical signs. Despite regular vaccine practices against FHV-1 in China, new FHV-1 cases still commonly occur. The genetic and phylogenetic characteristics of FHV-1 in Kunshan city of China has not been studied yet. Therefore, this study was planned to investigate the prevalence, molecular characteristics of circulating strains, and phylogenetic analyses of FHV-1. This is the first report of molecular epidemiology and phylogenetic characteristics of FHV-1 from naturally infected cats in Kunshan, China.

methodsThe occulo-nasal swabs were collected from diseased cats showing respiratory distress, conjunctivitis, and corneal ulcers at different veterinary clinics in Kunshan from 2022 to 2023. Clinical data and general information were recorded. Swab samples were processed for preliminary detection of FHV-1. Thymidine kinase (TK), glycoprotein B (gB) and glycoprotein D (gD) genes were sequenced and analyzed to investigate genetic diversity and evolution of FHV-1.

resultsThe FHV-1 genome was detected in 43 (43/200, 21.5%) samples using RT-PCR targeting the TK gene. Statistical analysis showed a significant correlation between age, vaccination status and living environment (p < 0.05) with FHV-1 positivity, while a non-significant correlation was observed for FHV-1 positivity and sex of cats (p > 0.05). Additionally, eight FHV-1 positive cats were co-infected with feline calicivirus (8/43,18.6%). FHV-1 identified in the present study was confirmed as FHV-1 based on phylogenetic analyses. The sequence analyses revealed that 43 FHV-1 strains identified in the present study did not differ much with reference strains within China and worldwide. A nucleotide homology of 99-100% was determined among gB, TK and gD genes nucleotide sequences when compared with standard strain C-27 and vaccine strains. Amino acid analysis showed some amino acid substitutions in TK, gB and gD protein sequences. A potential N-linked glycosylation site was observed in all TK protein sequences. Phylogenetic analyses revealed minor variations and short evolutionary distance among FHV-1 strains detected in this study.

conclusionsOur findings indicate that genomes of 43 FHV-1 strains are highly homogenous and antigenically similar, and the degree of variation in major envelope proteins between strains is low. This study demonstrated some useful data about prevalence, genetic characteristics, and evolution of FHV-1 in Kunshan, which may aid in future vaccine development.

Indexed as

Cat DiseasesGenetic VariationHerpesviridae InfectionsMolecular EpidemiologyPhylogenyVaricellovirusAnimalsCatsChinaFemaleMalePrevalenceChinaEpidemiologyFeline herpesvirusGenetic diversityPhylogenetic analysis

Identifiers

PMID38778352
PMCPMC11112849

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.