Evidence map›Paper›PMID 38778327›Full record

ArticleReproductive biology and endocrinology : RB&E2024

Testing the generalizability and effectiveness of deep learning models among clinics: sperm detection as a pilot study.

Jiaqi Wang, Yufei Jin, Aojun Jiang, Wenyuan Chen, Guanqiao Shan, Yifan Gu, Yue Ming, Jichang Li, Chunfeng Yue, Zongjie Huang and 6 more

Abstract read
In one paragraph

Article in Reproductive biology and endocrinology : RB&E, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Jiaqi Wang *School of Science and Engineering, The Chinese University of Hong Kong, Shenzhen, China.
Yufei Jin *School of Science and Engineering, The Chinese University of Hong Kong, Shenzhen, China.
Aojun JiangDepartment of Mechanical Engineering, University of Toronto, Toronto, Canada.
Wenyuan ChenDepartment of Mechanical Engineering, University of Toronto, Toronto, Canada.
Guanqiao ShanDepartment of Mechanical Engineering, University of Toronto, Toronto, Canada.
Yifan GuInstitute of Reproductive and Stem Cell Engineering, School of Basic Medical Science, Central South University, Changsha, China.
Yue MingSchool of Medicine, The Chinese University of Hong Kong, Shenzhen, China.
Jichang LiSchool of Medicine, The Chinese University of Hong Kong, Shenzhen, China.
Chunfeng YueSuzhou Boundless Medical Technology Ltd., Co., Suzhou, China.
Zongjie HuangSuzhou Boundless Medical Technology Ltd., Co., Suzhou, China.
Clifford LibrachCReATe Fertility Centre, Toronto, Canada.
Ge LinInstitute of Reproductive and Stem Cell Engineering, School of Basic Medical Science, Central South University, Changsha, China.
Xibu WangThe 3rd Affiliated Hospital of Shenzhen University, Shenzhen, China.
Huan ZhaoThe 3rd Affiliated Hospital of Shenzhen University, Shenzhen, China. dahuan4302@163.com.
Yu SunDepartment of Mechanical Engineering, University of Toronto, Toronto, Canada. yu.sun@utoronto.ca.
Zhuoran ZhangSchool of Science and Engineering, The Chinese University of Hong Kong, Shenzhen, China. zhangzhuoran@cuhk.edu.cn.

Funding

Chinese University of Hong Kong, Shenzhen UDF01002141Guangdong Basic and Applied Basic Research Foundation 2021A1515110023National Key Research and Development Program of China 2023YFE0205500National Natural Science Foundation of China 62203374Shenzhen Science and Technology Innovation Program RCBS20210706092254072
6 · The paper itself

Abstract

backgroundDeep learning has been increasingly investigated for assisting clinical in vitro fertilization (IVF). The first technical step in many tasks is to visually detect and locate sperm, oocytes, and embryos in images. For clinical deployment of such deep learning models, different clinics use different image acquisition hardware and different sample preprocessing protocols, raising the concern over whether the reported accuracy of a deep learning model by one clinic could be reproduced in another clinic. Here we aim to investigate the effect of each imaging factor on the generalizability of object detection models, using sperm analysis as a pilot example.

methodsAblation studies were performed using state-of-the-art models for detecting human sperm to quantitatively assess how model precision (false-positive detection) and recall (missed detection) were affected by imaging magnification, imaging mode, and sample preprocessing protocols. The results led to the hypothesis that the richness of image acquisition conditions in a training dataset deterministically affects model generalizability. The hypothesis was tested by first enriching the training dataset with a wide range of imaging conditions, then validated through internal blind tests on new samples and external multi-center clinical validations.

resultsAblation experiments revealed that removing subsets of data from the training dataset significantly reduced model precision. Removing raw sample images from the training dataset caused the largest drop in model precision, whereas removing 20x images caused the largest drop in model recall. by incorporating different imaging and sample preprocessing conditions into a rich training dataset, the model achieved an intraclass correlation coefficient (ICC) of 0.97 (95% CI: 0.94-0.99) for precision, and an ICC of 0.97 (95% CI: 0.93-0.99) for recall. Multi-center clinical validation showed no significant differences in model precision or recall across different clinics and applications.

conclusionsThe results validated the hypothesis that the richness of data in the training dataset is a key factor impacting model generalizability. These findings highlight the importance of diversity in a training dataset for model evaluation and suggest that future deep learning models in andrology and reproductive medicine should incorporate comprehensive feature sets for enhanced generalizability across clinics.

Indexed as

Deep LearningSpermatozoaFertilization in VitroHumansImage Processing, Computer-AssistedMalePilot ProjectsSemen AnalysisDeep learningGeneralizabilityMulticenter validationSemen analysisSperm detection

Identifiers

PMID38778327
PMCPMC11110326

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.