Evidence map›Paper›PMID 38778063›Full record

ArticleScientific data2024

A high-quality chromosome-level genome assembly of Ficus hirta.

Weicheng Huang, Yamei Ding, Songle Fan, Wanzhen Liu, Hongfeng Chen, Simon Segar, Stephen G Compton, Hui Yu

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Weicheng HuangPlant Resources Conservation and Sustainable Utilization, the Chinese Academy of Sciences, Guangzhou, 510650, China.
Yamei DingPlant Resources Conservation and Sustainable Utilization, the Chinese Academy of Sciences, Guangzhou, 510650, China.
Songle FanPlant Resources Conservation and Sustainable Utilization, the Chinese Academy of Sciences, Guangzhou, 510650, China.
Wanzhen LiuPlant Resources Conservation and Sustainable Utilization, the Chinese Academy of Sciences, Guangzhou, 510650, China.
Hongfeng ChenPlant Resources Conservation and Sustainable Utilization, the Chinese Academy of Sciences, Guangzhou, 510650, China.
Simon SegarDepartment of Crop and Environment Sciences, Harper Adams University, Newport, Shropshire, TF10 8NB, UK.
Stephen G ComptonSchool of Biology, University of Leeds, Leeds, LS2 9JT, UK.ORCID 0000-0002-1247-8058
Hui YuPlant Resources Conservation and Sustainable Utilization, the Chinese Academy of Sciences, Guangzhou, 510650, China. yuhui@scib.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ficus species (Moraceae) play pivotal roles in tropical and subtropical ecosystems. Thriving across diverse habitats, from rainforests to deserts, they harbor a multitude of mutualistic and antagonistic interactions with insects, nematodes, and pathogens. Despite their ecological significance, knowledge about the genomic background of Ficus remains limited. In this study, we report a chromosome-level reference genome of F. hirta, with a total size of 297.27 Mb, containing 28,625 protein-coding genes and 44.67% repeat sequences. These findings illuminate the genetic basis of Ficus responses to environmental challenges, offering valuable genomic resources for understanding genome size, adaptive evolution, and co-evolution with natural enemies and mutualists within the genus.

Indexed as

FicusGenome, PlantChromosomes, PlantGenome Size

Identifiers

PMID38778063
PMCPMC11111794

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.