Evidence map›Paper›PMID 38776814›Full record

ArticleJournal of hazardous materials2024

Use of Tox21 screening data to profile PFAS bioactivities on nuclear receptors, cellular stress pathways, and cytochrome p450 enzymes.

Masato Ooka, Srilatha Sakamuru, Jinghua Zhao, Yanyan Qu, Yuhong Fang, Dingyin Tao, Ruili Huang, Stephen Ferguson, David Reif, Anton Simeonov and 1 more

Abstract read
In one paragraph

Article in Journal of hazardous materials, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Masato OokaNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Srilatha SakamuruNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Jinghua ZhaoNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Yanyan QuNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Yuhong FangNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Dingyin TaoNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Ruili HuangNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Stephen FergusonDivision of Translational Toxicology, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
David ReifDivision of Translational Toxicology, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
Anton SimeonovNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA.
Menghang XiaNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, USA. Electronic address: mxia@mail.nih.gov.

Funding

Analytical ChemistryZICTR000037 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI LECLAIR, CHRISTOPHER ARTHUR · 2015 to 2025
$23.2M
Safe and Sustainable Alternatives Research ProgramZIAES103381 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI FERGUSON, STEPHEN · 2022 to 2025
$7.0M
Toxicology in the 21st Century Program (Tox21) - Systems ToxicologyZIATR000038 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI XIA, MENGHANG · 2015 to 2025
$5.7M
Toxicology in the 21st Century Program (Tox21) - Computational ToxicologyZIATR000040 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI HUANG, RUILI · 2016 to 2025
$3.5M
Intramural NIH HHS ZIA TR000038
6 · The paper itself

Abstract

Per- and poly-fluoroalkyl substances (PFAS) are synthetic chemicals widely used in commercial products. PFAS are a global concern due to their persistence in the environment and extensive associations with adverse health outcomes. While legacy PFAS have been extensively studied, many non-legacy PFAS lack sufficient toxicity information. In this study, we first analyzed the bioactivity of PFAS using Tox21 screening data surveying more than 75 assay endpoints (e.g., nuclear receptors, stress response, and metabolism) to understand the toxicity of non-legacy PFAS and investigate potential new targets of PFAS. From the Tox21 screening data analysis, we confirmed several known PFAS targets/pathways and identified several potential novel targets/pathways of PFAS. To confirm the effect of PFAS on these novel targets/pathways, we conducted several cell- and enzyme-based assays in the follow-up studies. We found PFAS inhibited cytochromes P450s (CYPs), especially CYP2C9 with IC

Indexed as

Cytochrome P-450 Enzyme SystemFluorocarbonsReceptors, Cytoplasmic and NuclearEnvironmental PollutantsHumansMolecular Docking SimulationStress, PhysiologicalCytochrome P-450 Enzyme SystemEnvironmental PollutantsFluorocarbonsReceptors, Cytoplasmic and NuclearCYP450sNuclear receptorsPFASStress response pathwaysTox21

Identifiers

PMID38776814
PMCPMC11181952

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.