Evidence map›Paper›PMID 38776489›Full record

ArticleBlood2024

Rapid tumor DNA analysis of cerebrospinal fluid accelerates treatment of central nervous system lymphoma.

Mihir Gupta, Joseph D Bradley, Elie Massaad, Evan J Burns, N Zeke Georgantas, Garrett E Maron, Julie M Batten, Aidan Gallagher, Julia Thierauf, Naema Nayyar and 26 more

Abstract read
In one paragraph

Article in Blood, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Mihir GuptaDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
Joseph D BradleyDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.ORCID 0009-0003-0318-8934
Elie MassaadDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
Evan J BurnsDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
N Zeke GeorgantasDepartment of Pathology, Massachusetts General Hospital, Boston, MA.
Garrett E MaronDepartment of Pathology, Massachusetts General Hospital, Boston, MA.
Julie M BattenDepartment of Pathology, Massachusetts General Hospital, Boston, MA.
Aidan GallagherDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
Julia ThieraufDepartment of Pathology, Massachusetts General Hospital, Boston, MA.
Naema NayyarCancer Center, Massachusetts General Hospital, Boston, MA.
Amanda GordonDivision of Neuro-Oncology, Department of Neurology, Massachusetts General Hospital Cancer Center, Boston, MA.
SooAe S JonesDivision of Neuro-Oncology, Department of Neurology, Massachusetts General Hospital Cancer Center, Boston, MA.
Michelle PisapiaDivision of Neuro-Oncology, Department of Neurology, Massachusetts General Hospital Cancer Center, Boston, MA.
Ying SunDivision of Neuro-Oncology, Department of Neurology, Massachusetts General Hospital Cancer Center, Boston, MA.
Pamela S JonesDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.ORCID 0000-0002-4573-3641
Fred G BarkerDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
William T CurryDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.ORCID 0000-0002-8036-1847
Rajiv GuptaDepartment of Neuroradiology, Massachusetts General Hospital, Boston, MA.ORCID 0000-0002-5882-960X
Javier M RomeroDepartment of Neuroradiology, Massachusetts General Hospital, Boston, MA.
Nancy WangDepartment of Medicine, Massachusetts General Hospital, Boston, MA.
Priscilla K BrastianosCancer Center, Massachusetts General Hospital, Boston, MA.
Maria Martinez-LageC.S. Kubik Laboratory for Neuropathology, Massachusetts General Hospital, Boston, MA.ORCID 0000-0002-5859-7562
Kensuke TateishiDepartment of Neurosurgery, Yokohama City University, Yokohama, Japan.ORCID 0000-0001-6895-9013
Deborah A ForstCancer Center, Massachusetts General Hospital, Boston, MA.
Brian V NahedDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.ORCID 0000-0001-8537-106X
Tracy T BatchelorDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Lauren L RitterhouseDepartment of Pathology, Massachusetts General Hospital, Boston, MA.
Florian IserDepartment of Neurology and Neuro-Oncology Program, National Center for Tumor Diseases, Heidelberg University Hospital, Heidelberg, Germany.ORCID 0009-0003-6514-817X
Tobias KesslerDepartment of Neurology and Neuro-Oncology Program, National Center for Tumor Diseases, Heidelberg University Hospital, Heidelberg, Germany.
Justin T JordanDivision of Neuro-Oncology, Department of Neurology, Massachusetts General Hospital Cancer Center, Boston, MA.ORCID 0000-0001-6198-817X
Jorg DietrichCancer Center, Massachusetts General Hospital, Boston, MA.
Matthew MeyersonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Daniel P CahillDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
Jochen K LennerzDepartment of Pathology, Massachusetts General Hospital, Boston, MA.ORCID 0000-0003-2434-4978
Bob S CarterDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.
Ganesh M ShankarDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA.

Funding

Liquid Biopsy for treatment stratification of IDH1.R132H and EGFRvIII mutant gliomasU01CA230697 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI CARTER, BOB S, SKOG, JOHAN · 2018 to 2022
$4.0M
Perioperative Targeted Genotyping in GliomaK08NS107634 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI SHANKAR, GANESH · 2019 to 2023
$966k
NCI NIH HHS U01 CA230697NINDS NIH HHS K08 NS107634
6 · The paper itself

Abstract

abstractDelays and risks associated with neurosurgical biopsies preclude timely diagnosis and treatment of central nervous system (CNS) lymphoma and other CNS neoplasms. We prospectively integrated targeted rapid genotyping of cerebrospinal fluid (CSF) into the evaluation of 70 patients with CNS lesions of unknown cause. Participants underwent genotyping of CSF-derived DNA using a quantitative polymerase chain reaction-based approach for parallel detection of single-nucleotide variants in the MYD88, TERT promoter, IDH1, IDH2, BRAF, and H3F3A genes within 80 minutes of sample acquisition. Canonical mutations were detected in 42% of patients with neoplasms, including cases of primary and secondary CNS lymphoma, glioblastoma, IDH-mutant brainstem glioma, and H3K27M-mutant diffuse midline glioma. Genotyping results eliminated the need for surgical biopsies in 7 of 33 cases (21.2%) of newly diagnosed neoplasms, resulting in significantly accelerated initiation of disease-directed treatment (median, 3 vs 12 days; P = .027). This assay was then implemented in a Clinical Laboratory Improvement Amendments environment, with 2-day median turnaround for diagnosis of CNS lymphoma from 66 patients across 4 clinical sites. Our study prospectively demonstrates that targeted rapid CSF genotyping influences oncologic management for suspected CNS tumors.

Indexed as

Central Nervous System NeoplasmsLymphomaAdultAgedAged, 80 and overDNA, NeoplasmFemaleHumansMaleMiddle AgedMutationProspective StudiesYoung AdultDNA, Neoplasm

Identifiers

PMID38776489
PMCPMC11406186

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.