Evidence map›Paper›PMID 38773934›Full record

ReviewNucleus (Austin, Tex.)2024

Long non-coding RNAs: roles in cellular stress responses and epigenetic mechanisms regulating chromatin.

Jeffrey A Nickerson, Fatemeh Momen-Heravi

Abstract readReview
In one paragraph

Review in Nucleus (Austin, Tex.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. The Role of Long Noncoding RNAs in Modulation of Stress Granules in Cancer.Journal of cellular and molecular medicine · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Insulin Resistance and Inflammation.International journal of molecular sciences · 2026
    Review
  8. Epigenetic Mechanisms of Suicidal Behavior Formation: A Review.Medical journal of the Islamic Republic of Iran · 2026
    Review
  9. Review
  10. Article
  11. Noncoding RNAs in nuclear organization.Nucleus (Austin, Tex.) · 2025
    Article
  12. Review
  13. Article
  14. Role of lncRNAs in pathophysiology of obesity.Current opinion in physiology · 2025
    Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Artificial miRNAs and target-mimics as potential tools for crop improvement.Physiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jeffrey A NickersonDivision of Genes & Development, Department of Pediatrics, University of Massachusetts Chan Medical School, Worcester, MA, USA.ORCID 0000-0002-3631-4488
Fatemeh Momen-HeraviCollege of Dental Medicine, Columbia University Medical Center, New York, NY, USA.ORCID 0000-0003-4534-1450

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Institutional Career Development CoreKL2TR001874 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GENKINGER, JEANINE M., SHIMBO, DAICHI · 2016 to 2025
$13.6M
Nuclear Dysfunction in Cancer: The Role of Mechanical Stresses Transmittedby the LINC ComplexU01CA225566 · NCI · UNIVERSITY OF FLORIDA · PI LELE, TANMAY P. · 2020 to 2024
$3.1M
Immune and transcriptomic biomarkers of progressive oral premalignant lesionsU01DE033351 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Fatemeh Momen Heravi · 2023 to 2026
$3.1M
Role of Long Non-Coding RNAs in Exosome BiogenesisR35GM151259 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Fatemeh Momen Heravi · 2023 to 2026
$1.6M
NCATS NIH HHS KL2 TR001874NCATS NIH HHS UL1 TR001873NCI NIH HHS U01 CA225566NIDCR NIH HHS L30 DE029070NIDCR NIH HHS U01 DE033351NIGMS NIH HHS R35 GM151259
6 · The paper itself

Abstract

Most of the genome is transcribed into RNA but only 2% of the sequence codes for proteins. Non-coding RNA transcripts include a very large number of long noncoding RNAs (lncRNAs). A growing number of identified lncRNAs operate in cellular stress responses, for example in response to hypoxia, genotoxic stress, and oxidative stress. Additionally, lncRNA plays important roles in epigenetic mechanisms operating at chromatin and in maintaining chromatin architecture. Here, we address three lncRNA topics that have had significant recent advances. The first is an emerging role for many lncRNAs in cellular stress responses. The second is the development of high throughput screening assays to develop causal relationships between lncRNAs across the genome with cellular functions. Finally, we turn to recent advances in understanding the role of lncRNAs in regulating chromatin architecture and epigenetics, advances that build on some of the earliest work linking RNA to chromatin architecture.

Indexed as

ChromatinEpigenesis, GeneticRNA, Long NoncodingAnimalsHumansStress, PhysiologicalChromatinRNA, Long NoncodingBuilding RNA structureschromatin architecturegenome-wide lncRNA screenslncRNARNP networksstress response

Identifiers

PMID38773934
PMCPMC11123517

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.