Evidence map›Paper›PMID 38772709›Full record

ReviewCold Spring Harbor perspectives in medicine2024

Integrating Omics into Functional Biomarkers of Type 1 Diabetes.

S Alice Long, Peter S Linsley

Abstract readReview
In one paragraph

Review in Cold Spring Harbor perspectives in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

S Alice LongCenter for Translational Immunology, Benaroya Research Institute, Seattle, Washington 98101, USA along@benaroyaresearch.org plinsley@benaroyaresearch.org.
Peter S LinsleyCenter for Systems Immunology, Benaroya Research Institute, Seattle, Washington 98101, USA along@benaroyaresearch.org plinsley@benaroyaresearch.org.

Funding

Defining mechanisms of CD8 T cell exhaustion in T1DR01AI141952 · NIAID · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI LONG, S ALICE · 2020 to 2024
$2.8M
NIAID NIH HHS R01 AI141952
6 · The paper itself

Abstract

Biomarkers are critical to the staging and diagnosis of type 1 diabetes (T1D). Functional biomarkers offer insights into T1D immunopathogenesis and are often revealed using "omics" approaches that integrate multiple measures to identify involved pathways and functions. Application of the omics biomarker discovery may enable personalized medicine approaches to circumvent the more recently appreciated heterogeneity of T1D progression and treatment. Use of omics to define functional biomarkers is still in its early years, yet findings to date emphasize the role of cytokine signaling and adaptive immunity in biomarkers of progression and response to therapy. Here, we share examples of the use of omics to define functional biomarkers focusing on two signatures, T-cell exhaustion and T-cell help, which have been associated with outcomes in both the natural history and treatment contexts.

Indexed as

BiomarkersDiabetes Mellitus, Type 1CytokinesDisease ProgressionGenomicsHumansPrecision MedicineProteomicsT-LymphocytesBiomarkersCytokines

Identifiers

PMID38772709
PMCPMC11216170

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.