Evidence map›Paper›PMID 38771357›Full record

ArticleMolecular genetics and genomics : MGG2024

Exome sequencing in four families with neurodevelopmental disorders: genotype-phenotype correlation and identification of novel disease-causing variants in VPS13B and RELN.

Tehseen Ullah Khan Afridi, Ambrin Fatima, Humayoon Shafique Satti, Zaineb Akram, Imran Khan Yousafzai, Wajahat Bin Naeem, Nasreen Fatima, Asmat Ali, Zafar Iqbal, Ayaz Khan and 7 more

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Article in Molecular genetics and genomics : MGG, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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  4. Impact of genetic test interpretation on aFrontiers in neuroscience · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Tehseen Ullah Khan AfridiDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan.ORCID http://orcid.org/0000-0003-1333-6104
Ambrin FatimaDepartment of Biological and Biomedical Sciences, The Aga Khan University, Karachi, 74800, Pakistan.
Humayoon Shafique SattiDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan.ORCID http://orcid.org/0000-0003-2139-6633
Zaineb AkramDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan.
Imran Khan YousafzaiDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan.
Wajahat Bin NaeemDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan.
Nasreen FatimaDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan.
Asmat AliDepartment of Biological and Biomedical Sciences, The Aga Khan University, Karachi, 74800, Pakistan.
Zafar IqbalDepartment of Neurology, Oslo University Hospital, Oslo, Norway.ORCID http://orcid.org/0000-0002-6387-8019
Ayaz KhanNational Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad, Pakistan.
Muhammad ShahzadDepartment of Neurosurgery, District Headquarter Hospital, Kohat, Pakistan.
Chunyu LiuInternational Peace Maternity and Child Health Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200030, China.
Mathias ToftDepartment of Neurology, Oslo University Hospital, Oslo, Norway.
Feng ZhangInstitute of Medical Genetics and Genomics, Fudan University, Shanghai, 200438, China.
Muhammad TariqNational Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad, Pakistan.
Erica E DavisAdvanced Center for Translational and Genetic Medicine, Stanley Manne Children's Research Institute, Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL, USA. EriDavis@luriechildrens.org.ORCID http://orcid.org/0000-0002-2412-8397
Tahir N KhanDepartment of Biological Sciences, National University of Medical Sciences, Rawalpindi, 46000, Pakistan. tkhan@luriechildrens.org.ORCID http://orcid.org/0000-0003-3096-8795

Funding

Higher Education Commision, Pakistan NRPU 20-12107Higher Education Commision, Pakistan NRPU 20-16914
6 · The paper itself

Abstract

Neurodevelopmental disorders (NDDs) are a clinically and genetically heterogeneous group of early-onset pediatric disorders that affect the structure and/or function of the central or peripheral nervous system. Achieving a precise molecular diagnosis for NDDs may be challenging due to the diverse genetic underpinnings and clinical variability. In the current study, we investigated the underlying genetic cause(s) of NDDs in four unrelated Pakistani families. Using exome sequencing (ES) as a diagnostic approach, we identified disease-causing variants in established NDD-associated genes in all families, including one hitherto unreported variant in RELN and three recurrent variants in VPS13B, DEGS1, and SPG11. Overall, our study highlights the potential of ES as a tool for clinical diagnosis.

Indexed as

Exome SequencingGenetic Association StudiesNeurodevelopmental DisordersPedigreeReelin ProteinVesicular Transport ProteinsCell Adhesion Molecules, NeuronalChildChild, PreschoolExomeFemaleGenetic Predisposition to DiseaseHumansMaleMutationPakistanCell Adhesion Molecules, NeuronalReelin ProteinRELN protein, humanVesicular Transport ProteinsVPS13B protein, humanExome sequencingMutation screeningNeurodevelopmental disorders

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.