Evidence map›Paper›PMID 38771271›Full record

ArticleThe Journal of general physiology2024

Hydrophobic residues in S1 modulate enzymatic function and voltage sensing in voltage-sensing phosphatase.

Vamseedhar Rayaprolu, Heini M Miettinen, William D Baker, Victoria C Young, Matthew Fisher, Gwendolyn Mueller, William O Rankin, John T Kelley, William J Ratzan, Lee Min Leong and 3 more

Abstract read
In one paragraph

Article in The Journal of general physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Voltage clamp fluorometry inBio-protocol · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Vamseedhar RayaproluDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0000-0002-2823-2984
Heini M MiettinenDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0000-0001-6249-8615
William D BakerDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0000-0001-5266-4181
Victoria C YoungDepartment of Biomedical Sciences, Cooper Medical School of Rowan University, Camden, NJ, USA.ORCID 0000-0002-4027-8694
Matthew FisherDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0009-0004-7878-9432
Gwendolyn MuellerDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0009-0000-9054-5562
William O RankinDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0009-0005-1371-7208
John T KelleyDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0009-0002-2534-3336
William J RatzanDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0000-0002-3426-2477
Lee Min LeongDivision of Bio-Medical Science and Technology, KIST School, Brain Science Institute, Korea Institute of Science and Technology (KIST), Korea University of Science and Technology (UST), Seoul, South Korea.ORCID 0009-0005-2169-0084
Joshua A DavissonDepartment of Cell Biology and Neuroscience, Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID 0000-0001-9791-7816
Bradley J BakerDivision of Bio-Medical Science and Technology, KIST School, Brain Science Institute, Korea Institute of Science and Technology (KIST), Korea University of Science and Technology (UST), Seoul, South Korea.ORCID 0000-0003-4652-5585
Susy C KohoutDepartment of Biomedical Sciences, Cooper Medical School of Rowan University, Camden, NJ, USA.ORCID 0000-0002-8159-8934

Funding

Research Core (Developmental Research Project Program)P20GM103474 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Jeffrey Good · 2012 to 2026
$60.0M
ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
Molecular mechanisms behind the voltage sensing phosphatase signalingR01GM111685 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI KOHOUT, SUSY C · 2015 to 2018
$1.1M
Korea Institute of Science and Technology 2E32901National Institute of General Medical ScienceNational Science Foundation 2310489NIGMS NIH HHS P20 GM103474NIGMS NIH HHS R01 GM111685NIGMS NIH HHS R01 GM129325NIH HHS R01GM111685
6 · The paper itself

Abstract

The voltage-sensing domain (VSD) is a four-helix modular protein domain that converts electrical signals into conformational changes, leading to open pores and active enzymes. In most voltage-sensing proteins, the VSDs do not interact with one another, and the S1-S3 helices are considered mainly scaffolding, except in the voltage-sensing phosphatase (VSP) and the proton channel (Hv). To investigate its contribution to VSP function, we mutated four hydrophobic amino acids in S1 to alanine (F127, I131, I134, and L137), individually or in combination. Most of these mutations shifted the voltage dependence of activity to higher voltages; however, not all substrate reactions were the same. The kinetics of enzymatic activity were also altered, with some mutations significantly slowing down dephosphorylation. The voltage dependence of VSD motions was consistently shifted to lower voltages and indicated a second voltage-dependent motion. Additionally, none of the mutations broke the VSP dimer, indicating that the S1 impact could stem from intra- and/or intersubunit interactions. Lastly, when the same mutations were introduced into a genetically encoded voltage indicator, they dramatically altered the optical readings, making some of the kinetics faster and shifting the voltage dependence. These results indicate that the S1 helix in VSP plays a critical role in tuning the enzyme's conformational response to membrane potential transients and influencing the function of the VSD.

Indexed as

Phosphoric Monoester HydrolasesAnimalsHumansHydrophobic and Hydrophilic InteractionsKineticsMutationPhosphorylationProtein DomainsXenopus laevisXenopus ProteinsPhosphoric Monoester Hydrolasesvoltage-sensor-containing phosphatase, Ciona intestinalisXenopus Proteins

Identifiers

PMID38771271
PMCPMC11109755

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.