Evidence map›Paper›PMID 38769518›Full record

ArticleBMC plant biology2024

Weighted gene co-expression network analysis reveals hub genes regulating response to salt stress in peanut.

Feifei Wang, Huarong Miao, Shengzhong Zhang, Xiaohui Hu, Ye Chu, Weiqiang Yang, Heng Wang, Jingshan Wang, Shihua Shan, Jing Chen

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Feifei WangShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China.
Huarong MiaoShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China.
Shengzhong ZhangShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China.
Xiaohui HuShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China.
Ye ChuDepartment of Horticulture, University of Georgia Tifton Campus, Tifton, GA, 31793, USA.
Weiqiang YangShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China.
Heng WangAgricultural Technical Service Center, Rizhao, 276700, Shandong, China.
Jingshan WangCollege of Agronomy, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Shihua ShanShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China.
Jing ChenShandong Peanut Research Institute, Qingdao, 266100, People's Republic of China. mianbaohua2008@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peanut (Arachis hypogaea L.) is an important oilseed crop worldwide. However, soil salinization becomes one of the main limiting factors of peanut production. Therefore, developing salt-tolerant varieties and understanding the molecular mechanisms of salt tolerance is important to protect peanut yield in saline areas. In this study, we selected four peanut varieties with contrasting response to salt challenges with T1 and T2 being tolerance and S1 and S2 being susceptible. High-throughput RNA sequencing resulted in more than 314.63 Gb of clean data from 48 samples. We identified 12,057 new genes, 7,971of which have functional annotations. KEGG pathway enrichment analysis of uniquely expressed genes in salt-tolerant peanut revealed that upregulated genes in the root are involved in the MAPK signaling pathway, fatty acid degradation, glycolysis/gluconeogenesis, and upregulated genes in the shoot were involved in plant hormone signal transduction and the MAPK signaling pathway. Na

Indexed as

ArachisGene Expression Regulation, PlantGene Regulatory NetworksSalt ToleranceGene Expression ProfilingGenes, PlantPlant RootsSalt StressHub genesPeanutRootSalt toleranceShootWGCNA

Identifiers

PMID38769518
PMCPMC11103959

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.