Evidence map›Paper›PMID 38768345›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Dissecting OGT's TPR domain to identify determinants of cellular function.

Sarah C Potter, Bettine E Gibbs, Forrest A Hammel, Cassandra M Joiner, Joao A Paulo, John Janetzko, Zebulon G Levine, George Q Fei, Stephen J Haggarty, Suzanne Walker

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Mammalian fatty acid synthase andBiochemistry and biophysics reports · 2026
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Identification of a Polypeptide Inhibitor ofJournal of the American Chemical Society · 2024
    Article
  11. Dissecting OGT's TPR domain to identify determinants of cellular function.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sarah C PotterDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-6808-180X
Bettine E GibbsDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.ORCID 0000-0001-5083-5143
Forrest A HammelDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.
Cassandra M JoinerDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.ORCID 0000-0003-0476-9418
Joao A PauloDepartment of Cell Biology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-4291-413X
John JanetzkoDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138.
Zebulon G LevineDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-0830-9032
George Q FeiDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-8008-0690
Stephen J HaggartyChemical Neurobiology Laboratory, Center for Genomic Medicine, Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA 02114.ORCID 0000-0002-7872-168X
Suzanne WalkerDepartment of Microbiology, Blavatnik Institute of Harvard Medical School, Boston, MA 02115.

Funding

TRANSLATIONAL PHARMACOLOGY COREP50GM107618 · NIGMS · HARVARD MEDICAL SCHOOL · PI MALISZEWSKI, LAURA ELIZABETH · 2014 to 2018
$10.8M
Structure, Function and Inhibition of Human O-GlcNAc TransferaseR01GM094263 · NIGMS · HARVARD MEDICAL SCHOOL · PI WALKER, SUZANNE · 2012 to 2024
$5.8M
Advancing Multiplexed Isobaric Tag-based Strategies for Proteome ProfilingR01GM132129 · NIGMS · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2019 to 2023
$1.7M
Characterizing the O-GIcNAc Transferase Tetratricopeptide Repeat Domain's Role in Substrate SelectionF32GM129889 · NIGMS · HARVARD MEDICAL SCHOOL · PI JOINER, CASSANDRA MARIE · 2019 to 2019
$62k
Canadian Government | Natural Sciences and Engineering Research Council of Canada (NSERC) PGS-M PGS-D3HHS | National Institutes of Health (NIH) R01 GM094263-11S1Massachusetts General Hospital (MGH) Stuart and Suzanne Steele MGH Research Scholar AwardNational Science Foundation (NSF) DGE1745303NIGMS NIH HHS F32 GM129889NIGMS NIH HHS P50 GM107618NIGMS NIH HHS R01 GM094263NIGMS NIH HHS R01 GM132129
6 · The paper itself

Abstract

O-GlcNAc transferase (OGT) is an essential mammalian enzyme that glycosylates myriad intracellular proteins and cleaves the transcriptional coregulator Host Cell Factor 1 to regulate cell cycle processes. Via these catalytic activities as well as noncatalytic protein-protein interactions, OGT maintains cell homeostasis. OGT's tetratricopeptide repeat (TPR) domain is important in substrate recognition, but there is little information on how changing the TPR domain impacts its cellular functions. Here, we investigate how altering OGT's TPR domain impacts cell growth after the endogenous enzyme is deleted. We find that disrupting the TPR residues required for OGT dimerization leads to faster cell growth, whereas truncating the TPR domain slows cell growth. We also find that OGT requires eight of its 13 TPRs to sustain cell viability. OGT-8, like the nonviable shorter OGT variants, is mislocalized and has reduced Ser/Thr glycosylation activity; moreover, its interactions with most of wild-type OGT's binding partners are broadly attenuated. Therefore, although OGT's five N-terminal TPRs are not essential for cell viability, they are required for proper subcellular localization and for mediating many of OGT's protein-protein interactions. Because the viable OGT truncation variant we have identified preserves OGT's essential functions, it may facilitate their identification.

Indexed as

N-AcetylglucosaminyltransferasesAnimalsCell ProliferationCell SurvivalGlycosylationHEK293 CellsHost Cell Factor C1HumansProtein BindingProtein DomainsTetratricopeptide RepeatHCFC1 protein, humanHost Cell Factor C1N-AcetylglucosaminyltransferasesO-GlcNAc transferaseOGT protein, humancell proliferationO-GlcNAc transferaseOGTtetratricopeptide repeatTPR

Identifiers

PMID38768345
PMCPMC11145291

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.