Evidence map›Paper›PMID 38766195›Full record

ArticlebioRxiv : the preprint server for biology2024

Microbiota and metabolic adaptation shape

Chunyi Zhou, Miranda B Pawline, Alejandro Pironti, Sabrina M Morales, Andrew I Perault, Robert J Ulrich, Magdalena Podkowik, Alannah Lejeune, Ashley DuMont, François-Xavier Stubbe and 9 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Chunyi ZhouDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.ORCID 0000-0003-1278-5901
Miranda B PawlineDepartment of Medicine, Division of Infectious Diseases, New York University Grossman School of Medicine, New York, NY 10016, USA.
Alejandro PirontiDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Sabrina M MoralesDepartment of Medicine, Division of Infectious Diseases, New York University Grossman School of Medicine, New York, NY 10016, USA.
Andrew I PeraultDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Robert J UlrichDepartment of Medicine, Division of Infectious Diseases, New York University Grossman School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-3217-5062
Magdalena PodkowikDepartment of Medicine, Division of Infectious Diseases, New York University Grossman School of Medicine, New York, NY 10016, USA.
Alannah LejeuneDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Ashley DuMontDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.
François-Xavier StubbeURPHYM-GEMO, University of Namur, rue de Bruxelles, 61, Namur 5000, Belgium.
Aryeh KormanMetabolomics Core Resource Laboratory, New York University Grossman School of Medicine, New York, NY 10016, USA.
Drew R JonesMetabolomics Core Resource Laboratory, New York University Grossman School of Medicine, New York, NY 10016, USA.
Jonas SchluterInstitute for Systems Genetics, Department of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-6214-9367
Anthony R RichardsonDepartment of Microbiology and Molecular Genetics, University of Pittsburgh, Pittsburgh, PA 15219, USA.
Paul D FeyDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Karl DrlicaPublic Health Research Institute, New Jersey Medical School, Rutgers University, Newark, NJ 07102, USA.
Ken CadwellDivision of Gastroenterology and Hepatology, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10016, USA.
Victor J TorresDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Bo ShopsinDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Richard Lewis Possemato · 1985 to 2026
$83.1M
Mechanisms of MRSA intestinal colonizationR01AI140754 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SHOPSIN, BO · 2020 to 2024
$3.5M
Host-pathogen interactions during hospital adaptation of MRSAR01AI137336 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SHOPSIN, BO, YANAI, ITAI · 2019 to 2022
$3.3M
The unleashed microbiome of cancer patients as a discovery platform for rational microbiome engineeringDP2AI164318 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SCHLUTER, JONAS · 2021 to 2025
$2.5M
Big Omics Data Engine 2 SupercomputerS10OD026880 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2019 to 2019
$2.0M
Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9M
Mechanisms of Prophage-Mediated Virulence Driving Community-Acquired MRSA ContagionK08AI163457 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ULRICH, ROBERT JAMES · 2021 to 2025
$989k
NCI NIH HHS P30 CA016087NIAID NIH HHS DP2 AI164318NIAID NIH HHS K08 AI163457NIAID NIH HHS R01 AI137336NIAID NIH HHS R01 AI140754NIH HHS S10 OD018522NIH HHS S10 OD026880
6 · The paper itself

Abstract

Depletion of microbiota increases susceptibility to gastrointestinal colonization and subsequent infection by opportunistic pathogens such as methicillin-resistant

Identifiers

PMID38766195
PMCPMC11100824

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.