Evidence map›Paper›PMID 38765953›Full record

ArticleFrontiers in endocrinology2024

Epigenetically active chromatin in neonatal iWAT reveals GABPα as a potential regulator of beige adipogenesis.

Raja Gopal Reddy Mooli, Bokai Zhu, Saifur R Khan, Veerababu Nagati, Kulandaimanuvel Antony Michealraj, Michael J Jurczak, Sadeesh K Ramakrishnan

Abstract read
In one paragraph

Article in Frontiers in endocrinology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Raja Gopal Reddy MooliDivision of Endocrinology and Metabolism, University of Pittsburgh, Pittsburgh, PA, United States.
Bokai ZhuDivision of Endocrinology and Metabolism, University of Pittsburgh, Pittsburgh, PA, United States.
Saifur R KhanDivision of Cardiology, University of Pittsburgh, Pittsburgh, PA, United States.
Veerababu NagatiDivision of Endocrinology and Metabolism, University of Pittsburgh, Pittsburgh, PA, United States.
Kulandaimanuvel Antony MichealrajCenter for Immunometabolism, University of Pittsburgh, Pittsburgh, PA, United States.
Michael J JurczakDivision of Endocrinology and Metabolism, University of Pittsburgh, Pittsburgh, PA, United States.
Sadeesh K RamakrishnanDivision of Endocrinology and Metabolism, University of Pittsburgh, Pittsburgh, PA, United States.

Funding

Role of Hypoxia-inducible factor-2a in L-cell nutrient sensing and metabolic homeostasisR01DK133406 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Sadeesh Kumar Ramakrishnan · 2022 to 2026
$2.3M
Deciphering the physiology of neonatal beige adipocytesR01DK134581 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Sadeesh Kumar Ramakrishnan · 2024 to 2026
$1.4M
NIDDK NIH HHS R01 DK133406NIDDK NIH HHS R01 DK134581
6 · The paper itself

Abstract

Background: Thermogenic beige adipocytes, which dissipate energy as heat, are found in neonates and adults. Recent studies show that neonatal beige adipocytes are highly plastic and contribute to >50% of beige adipocytes in adults. Neonatal beige adipocytes are distinct from recruited beige adipocytes in that they develop independently of temperature and sympathetic innervation through poorly defined mechanisms. Methods: We characterized the neonatal beige adipocytes in the inguinal white adipose tissue (iWAT) of C57BL6 postnatal day 3 and 20 mice (P3 and P20) by imaging, genome-wide RNA-seq analysis, ChIP-seq analysis, qRT-PCR validation, and biochemical assays. Results: We found an increase in acetylated histone 3 lysine 27 (H3K27ac) on the promoter and enhancer regions of beige-specific gene UCP1 in iWAT of P20 mice. Furthermore, H3K27ac ChIP-seq analysis in the iWAT of P3 and P20 mice revealed strong H3K27ac signals at beige adipocyte-associated genes in the iWAT of P20 mice. The integration of H3K27ac ChIP-seq and RNA-seq analysis in the iWAT of P20 mice reveal epigenetically active signatures of beige adipocytes, including oxidative phosphorylation and mitochondrial metabolism. We identify the enrichment of GA-binding protein alpha (GABPα) binding regions in the epigenetically active chromatin regions of the P20 iWAT, particularly on beige genes, and demonstrate that GABPα is required for beige adipocyte differentiation. Moreover, transcriptomic analysis and glucose oxidation assays revealed increased glycolytic activity in the neonatal iWAT from P20. Conclusions: Our findings demonstrate that epigenetic mechanisms regulate the development of peri-weaning beige adipocytes via GABPα. Further studies to better understand the upstream mechanisms that regulate epigenetic activation of GABPα and characterization of the metabolic identity of neonatal beige adipocytes will help us harness their therapeutic potential in metabolic diseases.

Indexed as

AdipogenesisChromatinEpigenesis, GeneticGA-Binding Protein Transcription FactorAdipocytes, BeigeAdipose Tissue, WhiteAnimalsAnimals, NewbornHistonesMaleMiceMice, Inbred C57BLThermogenesisChromatinGA-Binding Protein Transcription FactorHistonesbeige adipocyteepigenetic modificationGABPAneonatal adipose tissuesubcutaneous adipose tissue

Identifiers

PMID38765953
PMCPMC11099907

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.