Evidence map›Paper›PMID 38757354›Full record

ArticleAging cell2024

Age-related and species-specific methylation changes in the protein-coding marmoset sperm epigenome.

Marcus Dittrich, Laura Bernhardt, Christopher A Penfold, Thorsten E Boroviak, Charis Drummer, Rüdiger Behr, Tobias Müller, Thomas Haaf

Abstract read
In one paragraph

Article in Aging cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. rDNA Copy Number Variation and Methylation in Human and Mouse Sperm.International journal of molecular sciences · 2025
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marcus DittrichInstitute of Human Genetics, Julius Maximilians University, Würzburg, Germany.
Laura BernhardtInstitute of Human Genetics, Julius Maximilians University, Würzburg, Germany.
Christopher A PenfoldDepartment of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK.
Thorsten E BoroviakDepartment of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK.
Charis DrummerPlatform Degenerative Diseases, German Primate Center-Leibniz Institute for Primate Research, Göttingen, Germany.
Rüdiger BehrPlatform Degenerative Diseases, German Primate Center-Leibniz Institute for Primate Research, Göttingen, Germany.
Tobias MüllerDepartment of Bioinformatics, Julius Maximilians University, Würzburg, Germany.
Thomas HaafInstitute of Human Genetics, Julius Maximilians University, Würzburg, Germany.ORCID 0000-0002-0737-0763

Funding

Deutsche Forschungsgemeinschaft HA1374/19-1Medical Research Council MC_PC_17230Wellcome TrustWellcome Trust WT G117980
6 · The paper itself

Abstract

The sperm epigenome is thought to affect the developmental programming of the resulting embryo, influencing health and disease in later life. Age-related methylation changes in the sperm of old fathers may mediate the increased risks for reproductive and offspring medical problems. The impact of paternal age on sperm methylation has been extensively studied in humans and, to a lesser extent, in rodents and cattle. Here, we performed a comparative analysis of paternal age effects on protein-coding genes in the human and marmoset sperm methylomes. The marmoset has gained growing importance as a non-human primate model of aging and age-related diseases. Using reduced representation bisulfite sequencing, we identified age-related differentially methylated transcription start site (ageTSS) regions in 204 marmoset and 27 human genes. The direction of methylation changes was the opposite, increasing with age in marmosets and decreasing in humans. None of the identified ageTSS was differentially methylated in both species. Although the average methylation levels of all TSS regions were highly correlated between marmosets and humans, with the majority of TSS being hypomethylated in sperm, more than 300 protein-coding genes were endowed with species-specifically (hypo)methylated TSS. Several genes of the glycosphingolipid (GSL) biosynthesis pathway, which plays a role in embryonic stem cell differentiation and regulation of development, were hypomethylated (<5%) in human and fully methylated (>95%) in marmoset sperm. The expression levels and patterns of defined sets of GSL genes differed considerably between human and marmoset pre-implantation embryo stages and blastocyst tissues, respectively.

Indexed as

AgingCallithrixDNA MethylationEpigenomeSpecies SpecificitySpermatozoaAnimalsEpigenesis, GeneticHumansMaleTranscription Initiation Siteglycosphingolipid biosynthesis pathwaymale germ cellsmarmosetnon‐human primatepaternal age effectsperm methylometranscription start site

Identifiers

PMID38757354
PMCPMC11320356

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.