Evidence map›Paper›PMID 38757301›Full record

ArticleMolecular medicine reports2024

Genome‑wide association study and polygenic risk scores predict psoriasis and its shared phenotypes in Taiwan.

Jai-Sing Yang, Ting-Yuan Liu, Hsing-Fang Lu, Shih-Chang Tsai, Wen-Ling Liao, Yu-Jen Chiu, Yu-Wen Wang, Fuu-Jen Tsai

Abstract read
In one paragraph

Article in Molecular medicine reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jai-Sing Yang *Department of Medical Research, China Medical University Hospital, China Medical University, Taichung 404327, Taiwan, R.O.C.
Ting-Yuan Liu *Million‑Person Precision Medicine Initiative, Department of Medical Research, China Medical University Hospital, Taichung 404327, Taiwan, R.O.C.
Hsing-Fang LuMillion‑Person Precision Medicine Initiative, Department of Medical Research, China Medical University Hospital, Taichung 404327, Taiwan, R.O.C.
Shih-Chang TsaiDepartment of Biological Science and Technology, China Medical University, Taichung 406040, Taiwan, R.O.C.
Wen-Ling LiaoGraduate Institute of Integrated Medicine, China Medical University, Taichung 404333, Taiwan, R.O.C.
Yu-Jen ChiuDepartment of Surgery, Division of Plastic and Reconstructive Surgery, Taipei Veterans General Hospital, Taipei 112201, Taiwan, R.O.C.
Yu-Wen WangMillion‑Person Precision Medicine Initiative, Department of Medical Research, China Medical University Hospital, Taichung 404327, Taiwan, R.O.C.
Fuu-Jen TsaiDepartment of Medical Genetics, China Medical University Hospital, Taichung 404327, Taiwan, R.O.C.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Psoriasis is a chronic inflammatory dermatological disease, and there is a lack of understanding of the genetic factors involved in psoriasis in Taiwan. To establish associations between genetic variations and psoriasis, a genome‑wide association study was performed in a cohort of 2,248 individuals with psoriasis and 67,440 individuals without psoriasis. Using the ingenuity pathway analysis software, biological networks were constructed. Human leukocyte antigen (HLA) diplotypes and haplotypes were analyzed using Attribute Bagging (HIBAG)‑R software and chi‑square analysis. The present study aimed to assess the potential risks associated with psoriasis using a polygenic risk score (PRS) analysis. The genetic association between single nucleotide polymorphisms (SNPs) in psoriasis and various human diseases was assessed by phenome‑wide association study. METAL software was used to analyze datasets from China Medical University Hospital (CMUH) and BioBank Japan (BBJ). The results of the present study revealed 8,585 SNPs with a significance threshold of P<5x10‑8, located within 153 genes strongly associated with the psoriasis phenotype, particularly on chromosomes 5 and 6. This specific genomic region has been identified by analyzing the biological networks associated with numerous pathways, including immune responses and inflammatory signaling. HLA genotype analysis indicated a strong association between

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyMultifactorial InheritancePhenotypePolymorphism, Single NucleotidePsoriasisAdultAgedFemaleGenetic Risk ScoreGenotypeHaplotypesHLA AntigensHumansMaleMiddle AgedHLA Antigensbiological networksgenome‑wide association studyhuman leukocyte antigen genotypesphenome‑wide association studypolygenic risk scorepsoriasis

Identifiers

PMID38757301
PMCPMC11106694

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.