Evidence map›Paper›PMID 38756235›Full record

ArticleJID innovations : skin science from molecules to population health2024

An Optimized and Advanced Algorithm for the Quantification of Immunohistochemical Biomarkers in Keratinocytes.

Lindsey G Siegfried, Sophie M Bilik, Jamie L Burgess, Paola Catanuto, Ivan Jozic, Irena Pastar, Rivka C Stone, Marjana Tomic-Canic

Abstract read
In one paragraph

Article in JID innovations : skin science from molecules to population health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Evaluation of c-Myc and Phosphorylated Glucocorticoid Receptor (p-GR) for Predicting Diabetic Foot Ulcer Healing-A Diabetic Foot Consortium Study.Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society
    Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lindsey G SiegfriedWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Sophie M BilikWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Jamie L BurgessWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Paola CatanutoWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Ivan JozicWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Irena PastarWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Rivka C StoneWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.
Marjana Tomic-CanicWound Healing and Regenerative Medicine Research Program, Dr. Philip Frost Department of Dermatology and Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA.

Funding

Circulating urinary microRNAs as systemic biomarkers of healing outcomes in diabetic foot ulcersR61DK131897 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI STONE, RIVKA C., TOMIC-CANIC, MARJANA · 2022 to 2023
$821k
Circulating urinary microRNAs as systemic biomarkers of healing outcomes in diabetic foot ulcersR33DK131897 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI STONE, RIVKA C., TOMIC-CANIC, MARJANA · 2024 to 2025
$759k
NIDDK NIH HHS R33 DK131897NIDDK NIH HHS R61 DK131897
6 · The paper itself

Abstract

Advancements in pathology have given rise to software applications intended to minimize human error and improve efficacy of image analysis. Still, the subjectivity of image quantification performed manually and the limitations of the most ubiquitous tissue stain analysis software requiring parameters tuned by the observer, reveal the need for a highly accurate, automated nuclear quantification software specific to immunohistochemistry, with improved precision and efficiency compared with the methods currently in use. We present a method for the quantification of immunohistochemical biomarkers in keratinocyte nuclei proposed to overcome these limitations, contributing sensitive shape-focused segmentation, accurate nuclear detection, and automated device-independent color assessment, without observer-dependent analysis parameters.

Indexed as

Automated digital pathologyBiomarkerEpidermal structuresImmunohistochemistryQuantification

Identifiers

PMID38756235
PMCPMC11097113

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.