Evidence map›Paper›PMID 38755314›Full record

ArticleEuropean journal of human genetics : EJHG2024

Loss of heterozygosity in CCM2 cDNA revealing a structural variant causing multiple cerebral cavernous malformations.

Annabelle Chaussenot, Xavier Ayrignac, Nicolas Chatron, Terry Granchon-Riolzir, Pierre Labauge, Elisabeth Tournier-Lasserve, Florence Riant

Abstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Hitting the heights with CiteScore.European journal of human genetics : EJHG · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Annabelle ChaussenotDepartment of Medical Genetics, Hôpital de l'Archet 2, CHU de Nice, Nice, France.
Xavier AyrignacDepartment of Neurology, Gui de Chauliac Montpellier University Hospital, Montpellier University, Montpellier, France.
Nicolas ChatronDepartment of Medical Genetics, Hospices Civils de Lyon, Groupe Hospitalier Est, Bron, France.ORCID 0000-0003-0538-0981
Terry Granchon-RiolzirDepartment of Neurovascular Molecular Genetics AP-HP, Saint-Louis Hospital, Paris, France.
Pierre LabaugeDepartment of Neurology, Gui de Chauliac Montpellier University Hospital, Montpellier University, Montpellier, France.
Elisabeth Tournier-LasserveDepartment of Neurovascular Molecular Genetics AP-HP, Saint-Louis Hospital, Paris, France.
Florence RiantLaboratoire AURAGEN (Plan France Médecine Génomique 2025), Lyon, France. florence.riant@aphp.fr.ORCID 0000-0002-8648-2295

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Loss-of-function variants in CCM1/KRIT1, CCM2/MGC4607, and CCM3/PDCD10 genes are identified in the vast majority of familial cases with multiple cerebral cavernous malformations. However, genomic DNA sequencing combined with large rearrangement screening fails to detect a pathogenic variant in 5% of the patients. We report a family with two affected members harboring multiple CCM lesions, one with severe hemorrhages and one asymptomatic. No causative variant was detected using DNA sequencing of the three CCM genes, CNV detection analysis, and RNA sequencing. However, a loss of heterozygosity in CCM2 was observed on cDNA sequences in one of the two affected members, which strongly suggested that this locus might be involved. Whole genome sequencing (WGS) identified a balanced structural variant on chromosome 7 with a breakpoint interrupting the CCM2 gene, preventing normal mRNA synthesis. These data underline the importance of WGS in undiagnosed patients with typical multiple CCM.

Indexed as

Hemangioma, Cavernous, Central Nervous SystemLoss of HeterozygosityPedigreeAdultCarrier ProteinsChromosomes, Human, Pair 7DNA, ComplementaryFemaleHumansMaleMiddle AgedCarrier ProteinsCCM2 protein, humanDNA, Complementary

Identifiers

PMID38755314
PMCPMC11219781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.