Evidence map›Paper›PMID 38755230›Full record

ArticleScientific reports2024

APEX2-based proximity proteomic analysis identifies candidate interactors for Plasmodium falciparum knob-associated histidine-rich protein in infected erythrocytes.

Sébastien Charneau, Lucas Silva de Oliveira, Zenon Zenonos, Christine S Hopp, Izabela M D Bastos, Damarys Loew, Bérangère Lombard, Ariane Pandolfo Silveira, Giovanna de Carvalho Nardeli Basílio Lobo, Sônia Nair Bao and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Sébastien Charneau *Laboratory of Biochemistry and Protein Chemistry, Department of Cell Biology, Institute of Biology, University of Brasília, Brasília, 70910-900, Brazil. charneau@unb.br.ORCID 0000-0002-9364-7289
Lucas Silva de Oliveira *Laboratory of Biochemistry and Protein Chemistry, Department of Cell Biology, Institute of Biology, University of Brasília, Brasília, 70910-900, Brazil.
Zenon ZenonosWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Christine S HoppWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Izabela M D BastosLaboratory of Host Pathogen Interaction, Department of Cell Biology, Institute of Biology, University of Brasília, Brasília, 70910-900, Brazil.
Damarys LoewInstitut Curie, Centre de Recherche, PSL Research University, CurieCoreTech Mass Spectrometry Proteomics, 26 rue d'Ulm, 75248, Paris Cedex 05, France.ORCID 0000-0002-9111-8842
Bérangère LombardInstitut Curie, Centre de Recherche, PSL Research University, CurieCoreTech Mass Spectrometry Proteomics, 26 rue d'Ulm, 75248, Paris Cedex 05, France.
Ariane Pandolfo SilveiraLaboratory of Microscopy and Microanalysis, Department of Cell Biology, Institute of Biology, University of Brasilia, Brasília, 70910-900, Brazil.
Giovanna de Carvalho Nardeli Basílio LoboLaboratory of Microscopy and Microanalysis, Department of Cell Biology, Institute of Biology, University of Brasilia, Brasília, 70910-900, Brazil.
Sônia Nair BaoLaboratory of Microscopy and Microanalysis, Department of Cell Biology, Institute of Biology, University of Brasilia, Brasília, 70910-900, Brazil.
Philippe GrellierUMR 7245 MCAM Molecules of Communication and Adaptation of Microorganisms, Muséum National d'Histoire Naturelle, CNRS, 75231, Paris Cedex 05, France.
Julian C RaynerCambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK.ORCID 0000-0002-9835-1014

Funding

Wellcome TrustWellcome Trust (Wellcome) 206194/Z/17/ZWellcome Trust (Wellcome) 220266/Z/20/Z
6 · The paper itself

Abstract

The interaction of Plasmodium falciparum-infected red blood cells (iRBCs) with the vascular endothelium plays a crucial role in malaria pathology and disease. KAHRP is an exported P. falciparum protein involved in iRBC remodelling, which is essential for the formation of protrusions or "knobs" on the iRBC surface. These knobs and the proteins that are concentrated within them allow the parasites to escape the immune response and host spleen clearance by mediating cytoadherence of the iRBC to the endothelial wall, but this also slows down blood circulation, leading in some cases to severe cerebral and placental complications. In this work, we have applied genetic and biochemical tools to identify proteins that interact with P. falciparum KAHRP using enhanced ascorbate peroxidase 2 (APEX2) proximity-dependent biotinylation and label-free shotgun proteomics. A total of 30 potential KAHRP-interacting candidates were identified, based on the assigned fragmented biotinylated ions. Several identified proteins have been previously reported to be part of the Maurer's clefts and knobs, where KAHRP resides. This study may contribute to a broader understanding of P. falciparum protein trafficking and knob architecture and shows for the first time the feasibility of using APEX2-proximity labelling in iRBCs.

Indexed as

ErythrocytesPlasmodium falciparumProteomicsProtozoan ProteinsAscorbate PeroxidasesBiotinylationDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesHistidine-Rich GlycoproteinHumansMalaria, FalciparumMultifunctional EnzymesPeptidesProtein BindingProteinsAPEX2 protein, humanAscorbate PeroxidasesDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesHistidine-Rich Glycoproteinknob protein, Plasmodium falciparumMultifunctional EnzymesPeptidesProteinsProtozoan ProteinsAPEX2CRISPR-Cas9Exported proteinsKAHRPProtein–protein interactions

Identifiers

PMID38755230
PMCPMC11099048

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.