Evidence map›Paper›PMID 38755146›Full record

ArticleNature communications2024

Endocardial HDAC3 is required for myocardial trabeculation.

Jihyun Jang, Mette Bentsen, Ye Jun Kim, Erick Kim, Vidu Garg, Chen-Leng Cai, Mario Looso, Deqiang Li

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. mExperimental & molecular medicine · 2025
    Review
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Jihyun JangCenter for Cardiovascular Research, Abigail Wexner Research Institute, Nationwide Children's Hospital, Columbus, OH, 43215, USA.ORCID http://orcid.org/0000-0002-4548-2037
Mette BentsenBioinformatics Core Unit (BCU), Max Planck Institute for Heart and Lung Research, 61231, Bad Nauheim, Germany.ORCID http://orcid.org/0000-0002-8016-0199
Ye Jun KimDepartment of Surgery, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.ORCID http://orcid.org/0009-0006-8206-0251
Erick KimDepartment of Surgery, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.ORCID http://orcid.org/0009-0002-5281-0315
Vidu GargCenter for Cardiovascular Research, Abigail Wexner Research Institute, Nationwide Children's Hospital, Columbus, OH, 43215, USA.ORCID http://orcid.org/0000-0002-3778-5927
Chen-Leng CaiDepartment of Pediatrics, Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN, 46201, USA.
Mario LoosoBioinformatics Core Unit (BCU), Max Planck Institute for Heart and Lung Research, 61231, Bad Nauheim, Germany.ORCID http://orcid.org/0000-0003-1495-9530
Deqiang LiCenter for Cardiovascular Research, Abigail Wexner Research Institute, Nationwide Children's Hospital, Columbus, OH, 43215, USA. deqiang.li@nationwidechildrens.org.ORCID http://orcid.org/0000-0002-4603-2855

Funding

Cardiac regeneration by histone deacetylasesR01HL153406 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI LI, DEQIANG · 2020 to 2024
$1.9M
American Heart Association (American Heart Association, Inc.) 23CDA1046244American Heart Association (American Heart Association, Inc.) 23IPA1048560NHLBI NIH HHS R01 HL153406U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL153406
6 · The paper itself

Abstract

Failure of proper ventricular trabeculation is often associated with congenital heart disease. Support from endocardial cells, including the secretion of extracellular matrix and growth factors is critical for trabeculation. However, it is poorly understood how the secretion of extracellular matrix and growth factors is initiated and regulated by endocardial cells. We find that genetic knockout of histone deacetylase 3 in the endocardium in mice results in early embryo lethality and ventricular hypotrabeculation. Single cell RNA sequencing identifies significant downregulation of extracellular matrix components in histone deacetylase 3 knockout endocardial cells. Secretome from cultured histone deacetylase 3 knockout mouse cardiac endothelial cells lacks transforming growth factor ß3 and shows significantly reduced capacity in stimulating cultured cardiomyocyte proliferation, which is remarkably rescued by transforming growth factor ß3 supplementation. Mechanistically, we identify that histone deacetylase 3 knockout induces transforming growth factor ß3 expression through repressing microRNA-129-5p. Our findings provide insights into the pathogenesis of congenital heart disease and conceptual strategies to promote myocardial regeneration.

Indexed as

EndocardiumHistone DeacetylasesMyocytes, CardiacAnimalsCell ProliferationEndothelial CellsExtracellular MatrixHeart Defects, CongenitalHistone Deacetylase 3MiceMice, KnockoutMicroRNAsMyocardiumTransforming Growth Factor beta3Histone Deacetylase 3Histone DeacetylasesMicroRNAsTransforming Growth Factor beta3

Identifiers

PMID38755146
PMCPMC11099086

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.