Evidence map›Paper›PMID 38755120›Full record

ArticleNature communications2024

Optogenetic activation of dorsal raphe serotonin neurons induces brain-wide activation.

Hiro Taiyo Hamada, Yoshifumi Abe, Norio Takata, Masakazu Taira, Kenji F Tanaka, Kenji Doya

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Neurodevelopmental effects of early life stress: PFC and cognition.Neuroscience and biobehavioral reviews · 2026
    Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Brainwide blood volume reflects opposing neural populations.bioRxiv : the preprint server for biology · 2025
    Article
  16. Serotonin modulates nucleus accumbens circuits to suppress aggression.bioRxiv : the preprint server for biology · 2025
    Article
  17. Article
  18. Levodopa treatment: impacts and mechanisms throughout Parkinson's disease progression.Journal of neural transmission (Vienna, Austria : 1996) · 2025
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hiro Taiyo HamadaNeural Computation Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan. hamada_h@araya.org.ORCID http://orcid.org/0000-0002-7919-9125
Yoshifumi AbeDivision of Brain Sciences, Institute for Advanced Medical Research, Keio University School of Medicine, Tokyo, Japan.
Norio TakataDivision of Brain Sciences, Institute for Advanced Medical Research, Keio University School of Medicine, Tokyo, Japan.ORCID http://orcid.org/0000-0003-2754-8562
Masakazu TairaNeural Computation Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan.
Kenji F TanakaDivision of Brain Sciences, Institute for Advanced Medical Research, Keio University School of Medicine, Tokyo, Japan.ORCID http://orcid.org/0000-0003-2511-0057
Kenji DoyaNeural Computation Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan. doya@oist.jp.ORCID http://orcid.org/0000-0002-2446-6820

Funding

Japan Agency for Medical Research and Development (AMED) 22dm0207001Japan Agency for Medical Research and Development (AMED) JP18dm0207030Japan Agency for Medical Research and Development (AMED) JP22dm0207069MEXT | Japan Society for the Promotion of Science (JSPS) 20H05896MEXT | Japan Society for the Promotion of Science (JSPS) 23H04975MEXT | Japan Society for the Promotion of Science (JSPS) JP16H06563MEXT | Japan Society for the Promotion of Science (JSPS) JP19KK0387
6 · The paper itself

Abstract

Serotonin is a neuromodulator that affects multiple behavioral and cognitive functions. Nonetheless, how serotonin causes such a variety of effects via brain-wide projections and various receptors remains unclear. Here we measured brain-wide responses to optogenetic stimulation of serotonin neurons in the dorsal raphe nucleus (DRN) of the male mouse brain using functional MRI with an 11.7 T scanner and a cryoprobe. Transient activation of DRN serotonin neurons caused brain-wide activation, including the medial prefrontal cortex, the striatum, and the ventral tegmental area. The same stimulation under anesthesia with isoflurane decreased brain-wide activation, including the hippocampal complex. These brain-wide response patterns can be explained by DRN serotonergic projection topography and serotonin receptor expression profiles, with enhanced weights on 5-HT1 receptors. Together, these results provide insight into the DR serotonergic system, which is consistent with recent discoveries of its functions in adaptive behaviors.

Indexed as

Dorsal Raphe NucleusOptogeneticsSerotonergic NeuronsSerotoninAnimalsBrainHippocampusMagnetic Resonance ImagingMaleMiceMice, Inbred C57BLPrefrontal CortexReceptors, SerotoninVentral Tegmental AreaReceptors, SerotoninSerotonin

Identifiers

PMID38755120
PMCPMC11099070

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.