Evidence map›Paper›PMID 38753516›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

MACSPI enables tissue-selective proteomic and interactomic analyses in multicellular organisms.

Siyue Huang, Qiao Ran, Xiao-Meng Li, Xiucong Bao, Chaogu Zheng, Xiang David Li

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. MACSPI enables tissue-selective proteomic and interactomic analyses in multicellular organisms.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Siyue Huang *Department of Chemistry, The University of Hong Kong, Hong Kong, China.
Qiao Ran *School of Biological Sciences, Faculty of Science, The University of Hong Kong, Hong Kong, China.
Xiao-Meng LiDepartment of Chemistry, The University of Hong Kong, Hong Kong, China.
Xiucong BaoSchool of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China.ORCID 0000-0001-8069-8194
Chaogu ZhengSchool of Biological Sciences, Faculty of Science, The University of Hong Kong, Hong Kong, China.ORCID 0000-0002-5048-4520
Xiang David LiDepartment of Chemistry, The University of Hong Kong, Hong Kong, China.

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Health Bureau () HMRF 10212456MOST | National Natural Science Foundation of China (NSFC) Excellent Young Scientists Fund for Hong Kong and Macau 32122002NIH HHS P40 OD010440Research Grants Council, University Grants Committee () CRF C7026-20G GRF 17107021 and 17106322Research Grants Council, University Grants Committee () CRF C7028-19GF C7016-22G and C7009-20G AoE/P-705/16 GRF 17310122 17121120 and 17107123Research Grants Council, University Grants Committee () GRF 17104923Shenzhen Municipal Science and Technology Innovation Council | Shenzhen Science and Technology Innovation Program () Shenzhen-Hong Kong-Macau Technology Research Program SGDX2020110309520101University of Hong Kong (HKU) Strategic Interdisciplinary Research Scheme 2019/20
6 · The paper itself

Abstract

Multicellular organisms are composed of many tissue types that have distinct morphologies and functions, which are largely driven by specialized proteomes and interactomes. To define the proteome and interactome of a specific type of tissue in an intact animal, we developed a localized proteomics approach called Methionine Analog-based Cell-Specific Proteomics and Interactomics (MACSPI). This method uses the tissue-specific expression of an engineered methionyl-tRNA synthetase to label proteins with a bifunctional amino acid 2-amino-5-diazirinylnonynoic acid in selected cells. We applied MACSPI in

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsProteomeProteomicsAnimalsHSP90 Heat-Shock ProteinsMethionine-tRNA LigaseMusclesNeuronsOrgan SpecificityCaenorhabditis elegans ProteinsHSP90 Heat-Shock ProteinsMethionine-tRNA LigaseProteomeC. eleganschemical biologyinteractomicsprotein interaction networkstissue differentiation

Identifiers

PMID38753516
PMCPMC11126916

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.