Evidence map›Paper›PMID 38753067›Full record

ArticleArchives of virology2024

Complete genome sequence of a novel mitovirus identified in the phytopathogenic fungus Fusarium oxysporum f. sp. melonis strain T-SD3.

Huihui Hua, Xinyi Zhang, Yilin Yao, Xuehong Wu

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Huihui HuaCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Xinyi ZhangCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Yilin YaoCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Xuehong WuCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China. wuxuehong@cau.edu.cn.ORCID http://orcid.org/0000-0003-2669-2300

Funding

Beijing Innovation Consortium of Special Crops Research System BAIC04-2024
6 · The paper itself

Abstract

A novel mitovirus was identified in Fusarium oxysporum f. sp. melonis strain T-SD3 and designated as "Fusarium oxysporum mitovirus 3" (FoMV3). The virus was isolated from diseased muskmelon plants with the typical symptom of fusarium wilt. The complete genome of FoMV3 is 2269 nt in length with a predicted AU content of 61.40% and contains a single open reading frame (ORF) using the fungal mitochondrial genetic code. The ORF was predicted to encode a polypeptide of 679 amino acids (aa) containing a conserved RNA-dependent RNA polymerase (RdRp) domain with a molecular mass of 77.39 kDa, which contains six conserved motifs with the highly conserved GDD tripeptide in motif IV. The 5'-untranslated region (UTR) and 3'-UTR of FoMV3 were predicted to fold into stem-loop structures. BLASTp analysis revealed that the RdRp of FoMV3 shared the highest aa sequence identity (83.85%) with that of Fusarium asiaticum mitovirus 5 (FaMV5, a member of the family Mitoviridae) infecting F. asiaticum, the causal agent of wheat fusarium head blight. Phylogenetic analysis further suggested that FoMV3 is a new member of the genus Unuamitovirus within the family Mitoviridae. This is the first report of a new mitovirus associated with F. oxysporum f. sp. melonis.

Indexed as

Fungal VirusesFusariumGenome, ViralOpen Reading FramesPhylogenyPlant Diseases3' Untranslated Regions5' Untranslated RegionsAmino Acid SequenceBase SequenceCucumis meloRNA-Dependent RNA PolymeraseRNA, ViralRNA VirusesViral ProteinsWhole Genome Sequencing3' Untranslated Regions5' Untranslated RegionsRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID38753067

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.