Evidence map›Paper›PMID 38751872›Full record

ArticleIranian journal of medical sciences2024

Detection of Vancomycin Resistant Genes in Intrinsically Antibiotic Resistant Bacteria from the Gut Microbiota of Indonesian Individuals.

Arif Luqman, Jongkon Saising, Yulianto Ade Prasetya, Aparna Viswanathan Ammanath, Andini, Siti Nur Amala, Enny Zulaika, Nengah Dwianita Kuswytasari, Friedrich Goetz, Anjar Tri Wibowo

Abstract read
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Article in Iranian journal of medical sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Arif LuqmanDepartment of Biology, Institute Teknologi Sepuluh Nopember, Surabaya, Indonesia.
Jongkon SaisingSchool of Health Science and Biomedical Technology Research Group for Vulnerable Populations, Mae Fah Luang University, Chiang Rai, Thailand.
Yulianto Ade PrasetyaTechnology of Medical Laboratory, Anwar Medika University, Sidoarjo, Indonesia.
Aparna Viswanathan AmmanathMicrobial Genetics, Eberhard Karls University of Tuebingen, Tuebingen, Germany.
AndiniDepartment of Biology, Institute Teknologi Sepuluh Nopember, Surabaya, Indonesia.
Siti Nur AmalaDepartment of Biology, Institute Teknologi Sepuluh Nopember, Surabaya, Indonesia.
Enny ZulaikaDepartment of Biology, Institute Teknologi Sepuluh Nopember, Surabaya, Indonesia.
Nengah Dwianita KuswytasariDepartment of Biology, Institute Teknologi Sepuluh Nopember, Surabaya, Indonesia.
Friedrich GoetzMicrobial Genetics, Eberhard Karls University of Tuebingen, Tuebingen, Germany.
Anjar Tri WibowoDepartment of Biology, Faculty of Science and Technology, Airlangga University, Surabaya, Indonesia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Antibiotic resistance is a global public health concern that has been exacerbated by the overuse and misuse of antibiotics, leading to the emergence of resistant bacteria. The gut microbiota, often influenced by antibiotic usage, plays a crucial role in overall health. Therefore, this study aimed to investigate the prevalence of antibiotic resistant genes in the gut microbiota of Indonesian coastal and highland populations, as well as to identify vancomycin-resistant bacteria and their resistant genes. Methods: Stool samples were collected from 22 individuals residing in Pacet, Mojokerto, and Kenjeran, Surabaya Indonesia in 2022. The read count of antibiotic resistant genes was analyzed in the collected samples, and the bacterium concentration was counted by plating on the antibiotic-containing agar plate. Vancomycin-resistant strains were further isolated, and the presence of vancomycin-resistant genes was detected using a multiplex polymerase chain reaction (PCR). Results: The antibiotic resistant genes for tetracycline, aminoglycosides, macrolides, beta-lactams, and vancomycin were found in high frequency in all stool samples (100%) of the gut microbiota. Meanwhile, those meant for chloramphenicol and sulfonamides were found in 86% and 16% of the samples, respectively. Notably, vancomycin-resistant genes were found in 16 intrinsically resistant Gram-negative bacterial strains. Among the detected vancomycin-resistant genes, Conclusion: The presence of multiple vancomycin resistance genes in intrinsically resistant Gram-negative bacterial strains demonstrated the importance of the gut microbiota as a reservoir and hub for the horizontal transfer of antibiotic resistant genes.

Indexed as

Gastrointestinal MicrobiomeAdultAnti-Bacterial AgentsBacteriaFecesFemaleGenes, BacterialHumansIndonesiaMaleVancomycinVancomycin ResistanceAnti-Bacterial AgentsVancomycinAntibioticsGastrointestinal microbiomeHealth-riskIndonesiaVancomycin resistance

Identifiers

PMID38751872
PMCPMC11091268

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.