Evidence map›Paper›PMID 38750148›Full record

ArticleScientific reports2024

MRI-only based material mass density and relative stopping power estimation via deep learning for proton therapy: a preliminary study.

Yuan Gao, Chih-Wei Chang, Sagar Mandava, Raanan Marants, Jessica E Scholey, Matthew Goette, Yang Lei, Hui Mao, Jeffrey D Bradley, Tian Liu and 3 more

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Yuan GaoDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA.
Chih-Wei ChangDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA.
Sagar MandavaGE Healthcare, Atlanta, GA, 30308, USA.
Raanan MarantsDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women's Hospital, and Harvard Medical School, Boston, Massachusetts, USA.
Jessica E ScholeyDepartment of Radiation Oncology, The University of California, San Francisco, CA, 94143, USA.
Matthew GoetteDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA.
Yang LeiDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA.
Hui MaoDepartment of Radiology and Imaging Sciences and Winship Cancer Institute, Emory University, Atlanta, GA, USA.
Jeffrey D BradleyDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA.
Tian LiuRadiation Oncology, Mount Sinai Medical Center, New York, NY, USA.
Jun ZhouDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA.
Atchar SudhyadhomDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women's Hospital, and Harvard Medical School, Boston, Massachusetts, USA. atchar_sudhyadhom@dfci.harvard.edu.
Xiaofeng YangDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30308, USA. xiaofeng.yang@emory.edu.

Funding

eXtended Modular ANthropomorphic (XMAN) phantom for Imaging and Treatment Optimization in Radiotherapy.R01EB032680 · NIBIB · UNIVERSITY OF MARYLAND BALTIMORE · PI REN, LEI, YANG, XIAOFENG · 2022 to 2025
$2.4M
Multiparametric MRI-guided Prostate HDR Brachytherapy with Focal Tumor BoostR01CA215718 · NCI · EMORY UNIVERSITY · PI YANG, XIAOFENG · 2018 to 2022
$1.8M
Artificial Intelligence Driven Platform for PET/MR ImagingR56EB033332 · NIBIB · EMORY UNIVERSITY · PI MAO, HUI, YANG, XIAOFENG · 2022 to 2022
$764k
A Multimodal Imaging Approach Towards the Reduction of Proton Beam Range UncertaintiesR21EB026086 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SUDHYADHOM, ATCHAR · 2018 to 2020
$594k
National Institute for Health Care Management Foundation R01CA215718National Institute for Health Care Management Foundation R01EB032680National Institute for Health Care Management Foundation R56EB033332NCI NIH HHS R01 CA215718NIBIB NIH HHS R01 EB032680NIBIB NIH HHS R21 EB026086NIBIB NIH HHS R56 EB033332
6 · The paper itself

Abstract

Magnetic Resonance Imaging (MRI) is increasingly being used in treatment planning due to its superior soft tissue contrast, which is useful for tumor and soft tissue delineation compared to computed tomography (CT). However, MRI cannot directly provide mass density or relative stopping power (RSP) maps, which are required for calculating proton radiotherapy doses. Therefore, the integration of artificial intelligence (AI) into MRI-based treatment planning to estimate mass density and RSP directly from MRI has generated significant interest. A deep learning (DL) based framework was developed to establish a voxel-wise correlation between MR images and mass density as well as RSP. To facilitate the study, five tissue substitute phantoms were created, representing different tissues such as skin, muscle, adipose tissue, 45% hydroxyapatite (HA), and spongiosa bone. The composition of these phantoms was based on information from ICRP reports. Additionally, two animal tissue phantoms, simulating pig brain and liver, were prepared for DL training purposes. The phantom study involved the development of two DL models. The first model utilized clinical T1 and T2 MRI scans as input, while the second model incorporated zero echo time (ZTE) MRI scans. In the patient application study, two more DL models were trained: one using T1 and T2 MRI scans as input, and another model incorporating synthetic dual-energy computed tomography (sDECT) images to provide accurate bone tissue information. The DECT empirical model was used as a reference to evaluate the proposed models in both phantom and patient application studies. The DECT empirical model was selected as the reference for evaluating the proposed models in both phantom and patient application studies. In the phantom study, the DL model based on T1, and T2 MRI scans demonstrated higher accuracy in estimating mass density and RSP for skin, muscle, adipose tissue, brain, and liver. The mean absolute percentage errors (MAPE) were 0.42%, 0.14%, 0.19%, 0.78%, and 0.26% for mass density, and 0.30%, 0.11%, 0.16%, 0.61%, and 0.23% for RSP, respectively. The DL model incorporating ZTE MRI further improved the accuracy of mass density and RSP estimation for 45% HA and spongiosa bone, with MAPE values of 0.23% and 0.09% for mass density, and 0.19% and 0.07% for RSP, respectively. These results demonstrate the feasibility of using an MRI-only approach combined with DL methods for mass density and RSP estimation in proton therapy treatment planning. By employing this approach, it is possible to obtain the necessary information for proton radiotherapy directly from MRI scans, eliminating the need for additional imaging modalities.

Indexed as

Deep LearningMagnetic Resonance ImagingPhantoms, ImagingProton TherapyAnimalsHumansRadiotherapy DosageRadiotherapy Planning, Computer-AssistedSwineTomography, X-Ray Computed

Identifiers

PMID38750148
PMCPMC11096170

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