Evidence map›Paper›PMID 38748611›Full record

ArticleJournal of the American Society for Mass Spectrometry2024

Bortezomib Inhibits Open Configurations of the 20S Proteasome.

Lucas W Henderson, Amit K S Gautam, Edie M Sharon, Colin R Johnson, Nicholas G Rommel, Adam J Anthony, David H Russell, Martin F Jarrold, Andreas Matouschek, David E Clemmer

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Water Plays Key Roles in Stabilities of Wild Type and Mutant Transthyretin Complexes.Journal of the American Society for Mass Spectrometry · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lucas W HendersonDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.
Amit K S GautamDepartment of Molecular Biosciences, University of Texas, Austin, Texas 78712, United States.
Edie M SharonDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.
Colin R JohnsonDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.
Nicholas G RommelDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.
Adam J AnthonyDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.
David H RussellDepartment of Chemistry, Texas A&M University, College Station, Texas 77843, United States.ORCID 0000-0003-0830-3914
Martin F JarroldDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.ORCID 0000-0001-7084-176X
Andreas MatouschekDepartment of Molecular Biosciences, University of Texas, Austin, Texas 78712, United States.ORCID 0000-0001-6016-2341
David E ClemmerDepartment of Chemistry, Indiana University, Bloomington, Indiana 47401, United States.ORCID 0000-0003-4039-1360

Funding

Developing High-Resolution Ion Mobility Spectrometry-Charge Detection-Mass Spectrometry for Rapid Analysis in the Megadalton to Gigadalton RegimeR01GM131100 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E., JARROLD, MARTIN F · 2019 to 2022
$2.1M
Characterizing proteasome-substrate interactions by mass spectrometry proteomicsR01GM135264 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E., MATOUSCHEK, ANDREAS · 2020 to 2024
$1.4M
NIGMS NIH HHS R01 GM131100NIGMS NIH HHS R01 GM135264
6 · The paper itself

Abstract

Bortezomib, a small dipeptide-like molecule, is a proteasome inhibitor used widely in the treatment of myeloma and lymphoma. This molecule reacts with threonine side chains near the center of the 20S proteasome and disrupts proteostasis by blocking enzymatic sites that are responsible for protein degradation. In this work, we use novel mass-spectrometry-based techniques to examine the influence of bortezomib on the structures and stabilities of the 20S core particle. These studies indicate that bortezomib binding dramatically favors compact 20S structures (in which the axial gate is closed) over larger structures (in which the axial gate is open)─suppressing gate opening by factors of at least ∼400 to 1300 over the temperature range that is studied. Thus, bortezomib may also restrict degradation in the 20S proteasome by preventing substrates from entering the catalytic pore. That bortezomib influences structures at the entrance region of the pore at such a long distance (∼65 to 75 Å) from its binding sites raises a number of interesting biophysical issues.

Indexed as

BortezomibProteasome Endopeptidase ComplexProteasome InhibitorsHumansModels, MolecularProtein ConformationBortezomibProteasome Endopeptidase ComplexProteasome Inhibitors

Identifiers

PMID38748611
PMCPMC11886992

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.