Evidence map›Paper›PMID 38747742›Full record

ArticleRevista brasileira de epidemiologia = Brazilian journal of epidemiology2024

Prediction of tuberculosis clusters in the riverine municipalities of the Brazilian Amazon with machine learning.

Luis Silva, Luise Gomes da Motta, Lynn Eberly

Abstract read
In one paragraph

Article in Revista brasileira de epidemiologia = Brazilian journal of epidemiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Luis SilvaUniversity of Minnesota, Minneapolis - Minneapolis (MN), United States.ORCID http://orcid.org/0000-0001-5405-0589
Luise Gomes da MottaUniversidade Federal Fluminense - Niterói (RJ), Brazil.ORCID http://orcid.org/0000-0003-2283-1166
Lynn EberlyUniversity of Minnesota, Minneapolis - Minneapolis (MN), United States.ORCID http://orcid.org/0000-0003-4763-330X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTuberculosis (TB) is the second most deadly infectious disease globally, posing a significant burden in Brazil and its Amazonian region. This study focused on the "riverine municipalities" and hypothesizes the presence of TB clusters in the area. We also aimed to train a machine learning model to differentiate municipalities classified as hot spots vs. non-hot spots using disease surveillance variables as predictors.

methodsData regarding the incidence of TB from 2019 to 2022 in the riverine town was collected from the Brazilian Health Ministry Informatics Department. Moran's I was used to assess global spatial autocorrelation, while the Getis-Ord GI* method was employed to detect high and low-incidence clusters. A Random Forest machine-learning model was trained using surveillance variables related to TB cases to predict hot spots among non-hot spot municipalities.

resultsOur analysis revealed distinct geographical clusters with high and low TB incidence following a west-to-east distribution pattern. The Random Forest Classification model utilizes six surveillance variables to predict hot vs. non-hot spots. The machine learning model achieved an Area Under the Receiver Operator Curve (AUC-ROC) of 0.81.

conclusionMunicipalities with higher percentages of recurrent cases, deaths due to TB, antibiotic regimen changes, percentage of new cases, and cases with smoking history were the best predictors of hot spots. This prediction method can be leveraged to identify the municipalities at the highest risk of being hot spots for the disease, aiding policymakers with an evidenced-based tool to direct resource allocation for disease control in the riverine municipalities.

Indexed as

Machine LearningTuberculosisBrazilCitiesCluster AnalysisHumansIncidenceROC Curve

Identifiers

PMID38747742
PMCPMC11093519

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.