Evidence map›Paper›PMID 38746930›Full record

ArticleFrontiers in veterinary science2024

Development and preliminary application of a quadruplex real-time PCR assay for differential detection of porcine circovirus 1-4 in Chengdu, China.

Yong Mi, Di Huang, Yong Zhuo, Min Li, Jianguo Yue, Hongyu Zhong, Huanhuan Li, Zhijun Zhong, Haifeng Liu, Guangneng Peng and 3 more

Abstract read
In one paragraph

Article in Frontiers in veterinary science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yong Mi *College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Di Huang *College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Yong Zhuo *Key Laboratory for Animal Disease Resistant Nutrition of the Ministry of Education, Animal Nutrition Institute, Sichuan Agricultural University, Chengdu, China.
Min Li *Chengdu Center for Animal Disease Prevention and Control, Chengdu, China.
Jianguo YueChengdu Center for Animal Disease Prevention and Control, Chengdu, China.
Hongyu ZhongCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Huanhuan LiCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Zhijun ZhongCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Haifeng LiuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Guangneng PengCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Ling ZhuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Xiaoxiao ZhouChengdu Center for Animal Disease Prevention and Control, Chengdu, China.
Ziyao ZhouCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine circovirus (PCV) typically causes severe immune suppression in pigs, leading to mixed clinical infections with various pathogens that can cause significant harm to the pig industry. PCV has four subgenotypes, with PCV4 being an emerging virus that requires investigation due to its potential for epidemic outbreaks. Therefore, there is a need to develop a method that can detect all four PCV strains simultaneously. In this study, four pairs of specific primers and TaqMan probes were designed based on the conserved sequence of the PCV1-4 ORF2 gene to establish a PCV1-4 TaqMan multiplex real-time quantitative PCR method. The novel method was compared to six commercial testing kits for its efficacy. Then, a total of 595 mixed samples of spleen and lymph node collected from 12 districts in Chengdu from July to December 2021 were tested using the novel method. The results showed that the novel PCV1-4 TaqMan multiplex real-time quantitative PCR detection method has satisfied specificity, sensitivity, and repeatability. The positive rates of PCV1, PCV2, and PCV3 in Chengdu were 2.18%, 31.60%, and 15.29%, respectively, while no positive PCV4 was detected. The mixed infection rate of PCV2 and PCV3 was 5.21%. Our novel method may be as a potential method for PCV1-4 detection. Currently, PCV2 is the main epidemic PCV subtype in Chengdu, while the potential threat of PCV4 should also be considered.

Indexed as

analysis of epidemicgenetic evolutionary analysiskit comparisonporcine circovirusTaqMan multiplex real-time PCR

Identifiers

PMID38746930
PMCPMC11091263

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.