Evidence map›Paper›PMID 38746126›Full record

ArticlebioRxiv : the preprint server for biology2024

Cysteine Rich Intestinal Protein 2 is a copper-responsive regulator of skeletal muscle differentiation.

Odette Verdejo-Torres, David C Klein, Lorena Novoa-Aponte, Jaime Carrazco-Carrillo, Denzel Bonilla-Pinto, Antonio Rivera, Fa'alataitaua Fitisemanu, Martha L Jiménez-González, Lyra Flinn, Aidan T Pezacki and 7 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Odette Verdejo-TorresDepartment of Molecular Biology and Biochemistry, Wesleyan University, CT, 06459. USA.ORCID 0009-0006-6955-5428
David C KleinDepartment of Biological Sciences. University of Pittsburgh, Pittsburgh, PA. 15207. USA.ORCID 0000-0002-0250-809X
Lorena Novoa-ApontePresent address: Genetics and Metabolism Section, Liver Diseases Branch, National Institutes of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD. USA.ORCID 0000-0003-3348-8383
Jaime Carrazco-CarrilloDepartment of Molecular Biology and Biochemistry, Wesleyan University, CT, 06459. USA.ORCID 0000-0002-2108-0500
Denzel Bonilla-PintoDepartment of Molecular Biology and Biochemistry, Wesleyan University, CT, 06459. USA.ORCID 0009-0003-9544-2812
Antonio RiveraDepartment of Molecular Biology and Biochemistry, Wesleyan University, CT, 06459. USA.ORCID 0009-0001-3489-3148
Fa'alataitaua FitisemanuDepartment of Molecular Biology and Biochemistry, Wesleyan University, CT, 06459. USA.ORCID 0000-0002-9449-1327
Martha L Jiménez-GonzálezCentro de Investigación y Desarrollo Tecnológico en Electroquímica, Querétaro. México.ORCID 0000-0002-5460-7823
Lyra FlinnChemistry Department. Skidmore College, Saratoga Springs New York, 12866. USA.ORCID 0009-0008-6154-2010
Aidan T PezackiDepartment of Chemistry. University of California, Berkeley, California, 94720. USA.ORCID 0000-0002-7321-462X
Antonio LanzirottiCenter for Advanced Radiation Sources, The University of Chicago, Lemont, IL 60439. USA.ORCID 0000-0002-7597-5924
Luis Antonio Ortiz-FradeCentro de Investigación y Desarrollo Tecnológico en Electroquímica, Querétaro. México.ORCID 0000-0001-6523-8018
Christopher J ChangDepartment of Chemistry. University of California, Berkeley, California, 94720. USA.ORCID 0000-0001-5732-9497
Juan G NaveaChemistry Department. Skidmore College, Saratoga Springs New York, 12866. USA.ORCID 0000-0002-7723-6033
Crysten Blaby-HaasMolecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, USA & DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA. USA.ORCID 0000-0002-1583-1291
Sarah J HainerDepartment of Biological Sciences. University of Pittsburgh, Pittsburgh, PA. 15207. USA.ORCID 0000-0003-0503-1183
Teresita Padilla-BenavidesDepartment of Molecular Biology and Biochemistry, Wesleyan University, CT, 06459. USA.ORCID 0000-0002-4624-0822

Funding

Molecular Imaging Probes To Study Redox BiologyR01GM079465 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Christopher J. Chang · 2006 to 2026
$7.8M
Chromatin-mediated mechanisms of transcription regulation in ES cellsR35GM133732 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Sarah Jane Hainer · 2019 to 2026
$3.5M
Mechanisms of Cu-binding factors to promote myogenic gene expressionR01AR077578 · NIAMS · WESLEYAN UNIVERSITY · PI Teresita Del Nino Jesus Padilla-Benavides · 2021 to 2026
$2.1M
High-Throughput Computing for Genomics and Bioinformatics ResearchS10OD028483 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEE, ADRIAN V · 2021 to 2021
$574k
NIAMS NIH HHS R01 AR077578NIGMS NIH HHS R01 GM079465NIGMS NIH HHS R35 GM133732NIH HHS S10 OD028483
6 · The paper itself

Abstract

Copper (Cu) is an essential trace element required for respiration, neurotransmitter synthesis, oxidative stress response, and transcriptional regulation. Imbalance in Cu homeostasis can lead to several pathological conditions, affecting neuronal, cognitive, and muscular development. Mechanistically, Cu and Cu-binding proteins (Cu-BPs) have an important but underappreciated role in transcription regulation in mammalian cells. In this context, our lab investigates the contributions of novel Cu-BPs in skeletal muscle differentiation using murine primary myoblasts. Through an unbiased synchrotron X-ray fluorescence-mass spectrometry (XRF/MS) metalloproteomic approach, we identified the murine cysteine rich intestinal protein 2 (mCrip2) in a sample that showed enriched Cu signal, which was isolated from differentiating primary myoblasts derived from mouse satellite cells. Immunolocalization analyses showed that mCrip2 is abundant in both nuclear and cytosolic fractions. Thus, we hypothesized that mCrip2 might have differential roles depending on its cellular localization in the skeletal muscle lineage. mCrip2 is a LIM-family protein with 4 conserved Zn

Indexed as

copperCrip2myogenesistranscriptional regulation

Identifiers

PMID38746126
PMCPMC11092763

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.