Evidence map›Paper›PMID 38745099›Full record

ArticleScientific reports2024

Transcriptome analysis reveals the molecular mechanisms underlying the enhancement of salt-tolerance in Melia azedarach under salinity stress.

Na Li, Tianyun Shao, Li Xu, Xiaohua Long, Zed Rengel, Yu Zhang

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Na LiCollege of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Tianyun ShaoCollege of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China. T2022065@njau.edu.cn.
Li XuCollege of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Xiaohua LongInstitute of Crop sciences, Inner Mongolia Academy of Agricultural & Animal Husbandry Sciences, Inner Mongolia, 010031, China. lxh3555@126.com.
Zed RengelSoil Science and Plant Nutrition, UWA School of Agriculture and Environment, The University of Western Australia, 35 Stirling Highway, Perth, WA, 6009, Australia.
Yu ZhangInstitute of Crop sciences, Inner Mongolia Academy of Agricultural & Animal Husbandry Sciences, Inner Mongolia, 010031, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Melia azedarach demonstrates strong salt tolerance and thrives in harsh saline soil conditions, but the underlying mechanisms are poorly understood. In this study, we analyzed gene expression under low, medium, and high salinity conditions to gain a deeper understanding of adaptation mechanisms of M. azedarach under salt stress. The GO (gene ontology) analysis unveiled a prominent trend: as salt stress intensified, a greater number of differentially expressed genes (DEGs) became enriched in categories related to metabolic processes, catalytic activities, and membrane components. Through the analysis of the category GO:0009651 (response to salt stress), we identified four key candidate genes (CBL7, SAPK10, EDL3, and AKT1) that play a pivotal role in salt stress responses. Furthermore, the KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment analysis revealed that DEGs were significantly enriched in the plant hormone signaling pathways and starch and sucrose metabolism under both medium and high salt exposure in comparison to low salt conditions. Notably, genes involved in JAZ and MYC2 in the jasmonic acid (JA) metabolic pathway were markedly upregulated in response to high salt stress. This study offers valuable insights into the molecular mechanisms underlying M. azedarach salt tolerance and identifies potential candidate genes for enhancing salt tolerance in M. azedarach.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantSalt StressSalt ToleranceGene OntologyPlant ProteinsSalinityTranscriptomePlant ProteinsMelia azedarachMYC2Plant hormone signaling pathwaysSalt stressTranscriptome

Identifiers

PMID38745099
PMCPMC11094156

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.