Evidence map›Paper›PMID 38745088›Full record

ArticleBritish journal of cancer2024

Genomic profiling of small bowel adenocarcinoma: a pooled analysis from 3 databases.

Thomas Aparicio, Julie Henriques, Magali Svrcek, Aziz Zaanan, Sylvain Manfredi, Andrea Casadei-Gardini, David Tougeron, Jean-Marc Gornet, Marine Jary, Eric Terrebonne and 11 more

Abstract read
In one paragraph

Article in British journal of cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Thomas AparicioDepartment of Gastroenterology and Digestive Oncology, Saint Louis Hospital, APHP, Université de Paris Cité, Paris, France. thomas.aparicio@aphp.fr.ORCID http://orcid.org/0000-0001-8834-6927
Julie HenriquesMethodology and Quality of Life Unit in Oncology, CHU Besançon, Hôpital Jean Minjoz, Besançon, France.
Magali SvrcekSorbonne Université, Department of Pathology, Saint Antoine Hospital, APHP, Paris, France.
Aziz ZaananDepartment of Gastroenterology and Digestive Oncology, Georges Pompidou Hospital, APHP, Université de Paris Cité, Paris, France.
Sylvain ManfrediDigestive Cancer Registry of Burgundy, INSERM, LNC UMR1231, University Bourgogne Franche-Comté, Dijon-Bourgogne University Hospital, Dijon, France.
Andrea Casadei-GardiniDepartment of Oncology, IRCCS San Raffaele Scientific Institute Hospital, Milan, Italy.ORCID http://orcid.org/0000-0001-6289-7202
David TougeronDepartment of Hepato-Gastroenterology, CHU de Poitiers, Poitiers, France.ORCID http://orcid.org/0000-0002-8065-9635
Jean-Marc GornetDepartment of Gastroenterology and Digestive Oncology, Saint Louis Hospital, APHP, Université de Paris Cité, Paris, France.
Marine JaryDepartment of Digestive and Hepatobiliary Surgery, University Hospital of Clermont-Ferrand, U1071 INSERM, Clermont-Auvergne University, Clermont-Ferrand, France.
Eric TerrebonneDepartment of Gastroenterology, CHU Haut-Lévêque, Pessac, France.
Guillaume PiessenDepartment of Digestive and Oncological Surgery, Claude Huriez University Hospital, University Lille, Lille, France.
Pauline AfchainDepartment of Oncology, Saint Antoine Hospital, APHP, Paris, France.
Cédric LecailleDepartment of Gastroenterology, Polyclinic Bordeaux Nord, Bordeaux, France.
Marc PocardDepartment of Digestive Surgery, Pitié-Salpétrière Hospital, APHP, Paris, France.
Thierry LecomteDepartment of Hepato-Gastroenterology and Digestive Oncology, Trousseau Hospital, CHU Tours, Tours, France.
Margherita RiminiDepartment of Oncology, IRCCS San Raffaele Scientific Institute Hospital, Milan, Italy.
Frédéric Di FioreDepartment of Digestive Oncology, CHU Charles Nicolle, Rouen, France.
Valérie Le Brun LyDepartment of Oncology, CHU Dupuytren, Limoges, France.
Stefano CascinuDepartment of Oncology, IRCCS San Raffaele Scientific Institute Hospital, Milan, Italy.
Dewi VernereyMethodology and Quality of Life Unit in Oncology, CHU Besançon, Hôpital Jean Minjoz, Besançon, France.
Pierre Laurent PuigDepartment of Biology, Georges Pompidou Hospital, APHP, Université de Paris Cité, Paris, France.ORCID http://orcid.org/0000-0001-8475-5459

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSmall bowel adenocarcinoma is a rare disease. The genomic profiling tumours according to clinical characteristics and its impact on the prognosis remains unclear.

methodsA pooled analysis of clinical data, genomic profiling and MisMatch Repair (MMR) status from three databases was performed.

resultsA total of 188 tumour samples were analysed. A predisposing disease was reported in 22.3%, mainly Lynch syndrome and Crohn's disease. The tumours were localized in 80.2% and metastatic in 18.8%. The most frequent mutations were KRAS (42.0%) among them 7/79 are G12C, TP53 (40.4%), APC (19.1%), PIK3CA (18.6%), SMAD4 (12.8%) and ERBB2 (9.6%). Mutation distribution differed according to predisposing disease for TP53, ERBB2, IDH1, FGFR3, FGFR1 and KDR. KRAS and SMAD4 mutations were more frequent in metastatic tumour, whereas ERBB2 mutations were absent in metastatic tumour. For localized tumour, APC mutation was independently associated with a poor overall survival (OS) (p = 0.0254). 31.8% of localized tumours and 11.3% of metastatic tumours were dMMR (29.8% of the entire cohort). A dMMR status was associated with a better OS (HR = 0.61 [0.39-0.96], p = 0.0316).

conclusionsThere is a different genomic profile according to the stage and predisposing disease. dMMR and APC mutation in localized tumour predict a better prognosis.

Indexed as

AdenocarcinomaIntestinal NeoplasmsMutationAdultAgedAged, 80 and overDNA Mismatch RepairFemaleGene Expression ProfilingHumansIntestine, SmallMaleMiddle AgedPrognosis

Identifiers

PMID38745088
PMCPMC11231144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.