Evidence map›Paper›PMID 38742903›Full record

ArticleMicrobiology spectrum2024

Proteomics analysis of PK-15 cells infected with porcine parvovirus and the effect of PCBP1 on PPV replication.

Linqing Wang, Yue Song, Menglong Xu, Chi Zhang, Limeng Zhang, Lu Xia, Zhanyong Wei

Abstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Linqing Wang *College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, China.
Yue Song *College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, China.ORCID 0000-0002-8943-1530
Menglong XuCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, China.
Chi ZhangCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, China.
Limeng ZhangMolecule Biology Laboratory of Zhengzhou Normal University, Zhengzhou, Henan, China.
Lu XiaCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, China.ORCID 0000-0002-5574-2074
Zhanyong WeiCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, China.ORCID 0000-0001-8705-6426

Funding

Henan Natural Science Foundation 222300420586Key Science and Technology Program of Henan Province 232102311138Key Scientific Research Projects of Henan Higher Education Institutions 23B230008National Natural Science Foundation of China 31772722
6 · The paper itself

Abstract

Porcine parvovirus (PPV) is one of the most important pathogens that cause reproductive failure in pigs. However, the pathogenesis of PPV infection remains unclear. Proteomics is a powerful tool to understand the interaction between virus and host cells. In the present study, we analyzed the proteomics of PPV-infected PK-15 cells. A total of 32 and 345 proteins were differentially expressed at the early and replication stages, respectively. Subsequent gene ontology annotation and Kyoto Encyclopedia of Genes and Genomes enrichment analysis showed these differentially expressed proteins were significantly enriched in pathways including toll-like receptor signaling pathway, tumor necrosis factor signaling pathway, and viral carcinogenesis. The expression of poly (rC) binding protein 1 (PCBP1) was observed to decrease after PPV infection. Overexpressed or silenced PCBP1 expression inhibited or promoted PPV infection. Our studies established a foundation for further exploration of the multiplication mechanism of PPV. IMPORTANCE: Porcine parvovirus (PPV) is a cause of reproductive failure in the swine industry. Our knowledge of PPV remains limited, and there is no effective treatment for PPV infection. Proteomics of PPV-infected PK-15 cells was conducted to identify differentially expressed proteins at 6 hours post-infection (hpi) and 36 hpi. Gene ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analysis showed that various pathways participate in PPV infection. Poly (rC) binding protein 1 was confirmed to inhibit PPV replication, which provided potential targets for anti-PPV infection. Our findings improve the understanding of PPV infection and pave the way for future research in this area.

Indexed as

Parvoviridae InfectionsParvovirus, PorcineProteomicsRNA-Binding ProteinsSwine DiseasesVirus ReplicationAnimalsCell LineDNA-Binding ProteinsSwineDNA-Binding ProteinsRNA-Binding ProteinsPCBP1porcine parvovirusproteomicsreplication

Identifiers

PMID38742903
PMCPMC11237544

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.