Evidence map›Paper›PMID 38742294›Full record

ArticleJournal of Korean medical science2024

Genomic Analysis of Monkeypox Virus During the 2023 Epidemic in Korea.

Chi-Hwan Choi, Minji Lee, Sang Eun Lee, Jin-Won Kim, Hwachul Shin, Myung-Min Choi, Hwajung Yi, Min-Kyung Kim, Jaehyun Jeon, Jun-Sun Park and 4 more

Abstract read
In one paragraph

Article in Journal of Korean medical science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Chi-Hwan Choi *Korea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0002-8560-5230
Minji Lee *Korea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0003-4356-0051
Sang Eun LeeKorea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0002-0635-151X
Jin-Won KimKorea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0002-2374-1077
Hwachul ShinKorea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0002-2479-973X
Myung-Min ChoiKorea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0002-7242-297X
Hwajung YiKorea Disease Control and Prevention Agency, Cheongju, Korea.ORCID https://orcid.org/0000-0001-9381-0616
Min-Kyung KimDivision of Infectious Diseases, Department of Internal Medicine, National Medical Center, Seoul, Korea.ORCID https://orcid.org/0000-0003-0473-2797
Jaehyun JeonDivision of Infectious Diseases, Department of Internal Medicine, National Medical Center, Seoul, Korea.ORCID https://orcid.org/0000-0002-1725-8468
Jun-Sun ParkPublic Health Research Institute, National Medical Center, Seoul, Korea.ORCID https://orcid.org/0000-0003-2363-0390
Yeonjae KimDivision of Infectious Diseases, Department of Internal Medicine, National Medical Center, Seoul, Korea.ORCID https://orcid.org/0000-0003-4144-9077
So Yun LimDivision of Infectious Diseases, Department of Internal Medicine, National Medical Center, Seoul, Korea.ORCID https://orcid.org/0000-0002-5647-3718
BumSik ChinDivision of Infectious Diseases, Department of Internal Medicine, National Medical Center, Seoul, Korea. moberrer@nmc.or.kr.ORCID https://orcid.org/0000-0003-3021-1434
Yoon-Seok ChungKorea Disease Control and Prevention Agency, Cheongju, Korea. rollstone93@korea.kr.ORCID https://orcid.org/0000-0003-4562-5533

Funding

Korea Disease Control and Prevention Agency 6331-301-210-13
6 · The paper itself

Abstract

We aimed to characterize the genomes of monkeypox virus isolates from the Far East, providing insights into viral transmission and evolution. Genomic analysis was conducted on 8 isolates obtained from patients with monkeypox virus disease in the Republic of Korea between May 2022 and early 2023. These isolates were classified into Clade IIb. Distinct lineages, including B.1.1, A.2.1, and B.1.3, were observed in 2022 and 2023 isolates, with only the B.1.3 lineage detected in six isolates of 2023. These genetic features were specific to Far East isolates (the Republic of Korea, Japan, and Taiwan), distinguishing them from the diverse lineages found in the Americas, Europe, Africa, and Oceania. In early 2023, the prevalence of the B.1.3 lineage of monkeypox virus identified in six patients with no overseas travel history is considered as an indicator of the potential initiation of local transmission in the Republic of Korea.

Indexed as

Genome, ViralMonkeypox virusMpox, MonkeypoxPhylogenyEpidemicsFemaleGenomicsHumansMaleRepublic of KoreaRNA, ViralRNA, ViralGenomic AnalysisMonkeypox VirusMpox

Identifiers

PMID38742294
PMCPMC11091229

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.