Evidence map›Paper›PMID 38739671›Full record

ArticlePLoS computational biology2024

Topological state-space estimation of functional human brain networks.

Moo K Chung, Shih-Gu Huang, Ian C Carroll, Vince D Calhoun, H Hill Goldsmith

Abstract readTwin Study
In one paragraph

Article in PLoS computational biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Moo K ChungDepartment of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID 0000-0003-2852-9670
Shih-Gu HuangPPG/ECG Signal, Taipei, Taiwan.
Ian C CarrollDepartment of Child and Adolescent Psychiatry, New York University Grossman School of Medicine, New York, United States of America.
Vince D CalhounTri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, Georgia, United States of America.
H Hill GoldsmithDepartment of Psychology & Waisman Center, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID 0000-0002-0254-4699

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 1985 to 2015
$25.2M
TRAINING PROGRAM IN EMOTION RESEARCHT32MH018931 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI Richard J Davidson · 1989 to 2026
$11.6M
Validating RDoC for Children and Adolescents: A Twin Study with NeuroimagingR01MH101504 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI GOLDSMITH, HAROLD HILL · 2014 to 2017
$2.4M
Dynamic embedding time series models in functional brain imagingR01MH133614 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI MOO K CHUNG · 2023 to 2026
$1.4M
BRAIN Initiative: Theories, Models and Methods for Analysis of Complex Data from the BrainR01EB022856 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2016 to 2018
$1.1M
Dynamic manifold-valued time series model in functional brain imagingR01EB028753 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2020 to 2022
$942k
NIBIB NIH HHS R01 EB022856NIBIB NIH HHS R01 EB028753NICHD NIH HHS P30 HD003352NIMH NIH HHS R01 MH101504NIMH NIH HHS R01 MH133614NIMH NIH HHS T32 MH018931
6 · The paper itself

Abstract

We introduce an innovative, data-driven topological data analysis (TDA) technique for estimating the state spaces of dynamically changing functional human brain networks at rest. Our method utilizes the Wasserstein distance to measure topological differences, enabling the clustering of brain networks into distinct topological states. This technique outperforms the commonly used k-means clustering in identifying brain network state spaces by effectively incorporating the temporal dynamics of the data without the need for explicit model specification. We further investigate the genetic underpinnings of these topological features using a twin study design, examining the heritability of such state changes. Our findings suggest that the topology of brain networks, particularly in their dynamic state changes, may hold significant hidden genetic information.

Indexed as

BrainNerve NetAdultAlgorithmsBrain MappingCluster AnalysisComputational BiologyFemaleHumansMagnetic Resonance ImagingMaleModels, NeurologicalYoung Adult

Identifiers

PMID38739671
PMCPMC11115255

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.