Evidence map›Paper›PMID 38738632›Full record

ArticleActa naturae

Modern Approaches to de novo Synthesis of Extended DNA Fragments: Assembly of a Wide Repertoire of Sequences.

T A Semashko, G Y Fisunov, E A Tsoy, D R Kharrasov, I K Chudinov, D V Evsyutina, G Y Shevelev, V M Govorun

Abstract read
In one paragraph

Article in Acta naturae. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

T A SemashkoResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.
G Y FisunovResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.
E A TsoyResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.
D R KharrasovResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.
I K ChudinovResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.
D V EvsyutinaResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.
G Y ShevelevInstitute of Chemical Biology and Fundamental Medicine, Novosibirsk, 630090 Russian Federation.
V M GovorunResearch Institute for Systems Biology and Medicine, Moscow, 117246 Russian Federation.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The standardization of DNA fragment assembly methods for many tasks of synthetic biology is crucial. This is necessary for synthesizing a wider repertoire of sequences, as well as for further automation and miniaturization of such reactions. In this work, we proposed conditions for the assembly of DNA fragments from chemically synthesized oligonucleotides and we identified the errors occurring in the sequence under these conditions. Additionally, we proposed conditions for further combining synthetic fragments into larger DNA fragments. We showed that the optimized conditions are suitable for the assembly of a wide range of sequences.

Indexed as

DNA artificial synthesisDNA synthesisgene assemblygene synthesisPCR assemblypolymerase cyclic assemblyspermidine

Identifiers

PMID38738632
PMCPMC11062099

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.