Evidence map›Paper›PMID 38737917›Full record

ArticleBreeding science2023

Genomic traces of Japanese malting barley breeding in two modern high-quality cultivars, 'Sukai Golden' and 'Sachiho Golden'.

Shin Taketa, June-Sik Kim, Hidekazu Takahashi, Shunsuke Yajima, Yuichi Koshiishi, Toshinori Sotome, Tsuneo Kato, Keiichi Mochida

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Breeding science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Identification ofGenes · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shin TaketaInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama 710-0046, Japan.
June-Sik KimInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama 710-0046, Japan.
Hidekazu TakahashiFaculty of Food and Agricultural Sciences, Fukushima University, Fukushima 960-1296, Japan.
Shunsuke YajimaNODAI Genome Research Center, Tokyo University of Agriculture, Tokyo 156-8502, Japan.
Yuichi KoshiishiNODAI Genome Research Center, Tokyo University of Agriculture, Tokyo 156-8502, Japan.
Toshinori SotomeTochigi Prefectural Agricultural Experiment Station, Utsunomiya, Tochigi 320-0002, Japan.
Tsuneo KatoTochigi Prefectural Agricultural Experiment Station, Utsunomiya, Tochigi 320-0002, Japan.
Keiichi MochidaBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa 230-0045, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two modern high-quality Japanese malting barley cultivars, 'Sukai Golden' and 'Sachiho Golden', were subjected to RNA-sequencing of transcripts extracted from 20-day-old immature seeds. Despite their close relation, 2,419 Sukai Golden-specific and 3,058 Sachiho Golden-specific SNPs were detected in comparison to the genome sequences of two reference cultivars: 'Morex' and 'Haruna Nijo'. Two single nucleotide polymorphism (SNP) clusters respectively showing the incorporation of (1) the barley yellow mosaic virus (BaYMV) resistance gene

Indexed as

genetic diversityHordeum vulgareRNA-sequencingseed transcriptomesingle nucleotide polymorphismvirus disease resistance genes

Identifiers

PMID38737917
PMCPMC11082453

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.